Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 374 1e-98 seq6 165 1e-35 seq5 93.3 6e-14 >seq12 Length=595278 Score = 374 bits (414), Expect = 1e-98 Identities = 774/1147 (67%), Gaps = 6/1147 (1%) Strand=Plus/Minus Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || || || |||||||| || ||||| || | | || || || || ||| Sbjct 156996 ACTTCAACGACTCCCAGCGACAGGCTACCAAGGATGCCGGAGTCATCGCCGGACTTAACG 156937 Query 195792 GTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACA 195851 ||| |||| ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 156936 TTCTCCGAATCATCAACGAGCCTACCGCCGCCGCCATCGCTTACGGTCTTGACAAGAAGG 156877 Query 195852 AGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCAC 195911 || || || || || | ||||| ||||| || || || || || |||||||| | Sbjct 156876 TCATCGGTGAGAAGAACGTTCTCATCTTCGATCTTGGAGGAGGAACCTTCGATGTCTCCC 156817 Query 195912 TTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAG 195971 |||| | || || | ||||| ||||| || ||| | ||||| || || || || | | Sbjct 156816 TTCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGAGACACCCACTTGG 156757 Query 195972 GTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT-GTCTGATGAGTTCCGTCGAAAG 196030 | || || || |||||| || ||| || || || ||| | |||||| |||||| Sbjct 156756 GAGGAGAGGACTTCGATAACCGACTTGTCAACCACTTCGTCC-AGGAGTTCAAGCGAAAG 156698 Query 196031 AATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAA 196090 || ||||| || || | ||||| || | |||||||| || || | || || ||||| Sbjct 156697 AACAAGAAGGACATCACCGGAAACCCCCGAGCTCTTCGACGACTCCGAACCGCCTGTGAG 156638 Query 196091 CGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTT 196150 || || || ||||| ||||||||| | || || || | | ||||| || || | || Sbjct 156637 CGAGCTAAGCGAACCCTCTCTTCTGCCGCCCAGACCACCATCGAGATCGACTCCCTCTTC 156578 Query 196151 GACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGAT 196210 ||||||||||||||||| || | | || || || || || || ||| | | ||| Sbjct 156577 GACGGAATTGACTTCTACACTTCCCTCACTCGAGCTCGATTCGAGGAGCTCTGCCAGGAT 156518 Query 196211 TTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATA 196268 | || ||||| ||||| || || || | || || || || |||||||| | Sbjct 156517 CTCTTCCGAGGAA--CCATGGATCCCGTCGAGAAGGTCCTGAAGGATGCCAAGATGGACA 156460 Query 196269 AGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAAC 196328 |||| | || | || |||||||| || |||||||| || || || || ||||| || Sbjct 156459 AGTCCACTGTCCACGAGATTGTCCTCGTCGGAGGATCCACTCGAATCCCCAAGATCCAGA 156400 Query 196329 AGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAG 196388 || | | ||| ||||||| || || ||||| | || ||||| ||||| | Sbjct 156399 AGCTTGTCTCTGACTTCTTCTCCGGAAAGGAGCCCAACAAGTCCATTAACCCTGATGAGG 156340 Query 196389 CAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACG 196448 | |||||||| || || ||||| ||||| || |||||||| || | | | | | || Sbjct 156339 CTGTTGCTTACGGAGCCGCCGTCCAGGCCGCCATTCTCTCTGGAGATACCTCTGAGAAGA 156280 Query 196449 TCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTG 196508 ||| || | || || || |||||||| || | ||| ||| |||| || || || | Sbjct 156279 CCCAGGACTTGCTCCTCCTCGATGTTGCCCCTCTTTCCACTGGTATTGAGACCGCTGGAG 156220 Query 196509 GTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCT 196568 ||||| | ||| | || | | ||||| || |||| || |||||| | ||| Sbjct 156219 GTGTTTTCACTGCTTTGATCAAGCGAAACACCACCGTTCCTACCAAGAAGTCCGAGATCT 156160 Query 196569 TTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCT 196628 | || || || | || || || || || |||| ||| || || | || ||||| || Sbjct 156159 TCTCCACTTACGCTGACAACCAGCCCGGAGTTCTTATCCAGGTCTTCGAGGGAGAGCGAG 156100 Query 196629 CCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCAC 196688 |||| | ||||| ||| | | || |||| ||||| | | || || || |||| | Sbjct 156099 CCCGAACTAAGGACAACAACTTGCTCGGAAAGTTCGAGCTTTCTGGTATCCCCCCTGCGC 156040 Query 196689 CCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACG 196748 || |||| ||||| ||||| | || |||||| || || || || || | |||| Sbjct 156039 CCCGAGGAGTTCCCCAGATCGAGGTCACCTTCGACATTGATGCCAACTCTATCTTGAACG 155980 Query 196749 TCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGG 196808 || | |||| |||||| | | || || || | ||||| || ||||| || |||| Sbjct 155979 TCTCTGCTGCCGACAAGACCACCGGAAAGTCCAACAAGATCACCATCACCAACGATAAGG 155920 Query 196809 GGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAG 196868 | || || || |||||||| ||||| || ||||| || || || ||||||| ||| | Sbjct 155919 GACGACTCTCCAAGGAGGACATTGAGCGAATGGTCTCCGAGGCTGAGAAGTACAAGGACG 155860 Query 196869 AAGACGA 196875 | || || Sbjct 155859 AGGATGA 155853 >seq6 Length=1120801 Score = 165 bits (182), Expect = 1e-35 Identities = 151/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || ||||| |||||||||||||| || || || ||||| ||| |||| Sbjct 511847 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 511906 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| || |||||||| || || || || |||||||| ||| | || || || || Sbjct 511907 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 511966 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 || |||||||| || ||||| ||||| | || |||||| | || ||||||||||| || Sbjct 511967 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCTT 512026 Query 172063 CACCTTGTTCT 172073 || || ||||| Sbjct 512027 CATCTCGTTCT 512037 Score = 143 bits (158), Expect = 4e-29 Identities = 133/169 (79%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || ||||| |||||||||||||| || || || ||||| ||| |||| Sbjct 511483 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 511542 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| || |||||||| || || || || |||||||| ||| | || || || || Sbjct 511543 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 511602 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 || |||||||| || ||||| ||||| | || |||||| | || |||| Sbjct 511603 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGG 511651 >seq5 Length=1443891 Score = 93.3 bits (102), Expect = 6e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || |||||||| || || || |||||||||||||| ||||| || Sbjct 854994 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACCATCACCCTCGAGGTGGAGTCTTCG 854935 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTC 171952 ||||| ||||| ||| |||| |||||| ||| Sbjct 854934 GACACCATCGACAACGTCAAGGCCAAGGTTC 854904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862046398960