Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq19 152 3e-32 seq6 93.3 3e-14 seq5 86.0 4e-12 >seq19 Length=309173 Score = 152 bits (168), Expect = 3e-32 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||| | |||||| ||||| ||||| | |||| ||||||||| ||||| || ||||| Sbjct 224966 TCCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 224907 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 ||| | || |||| || || ||||| ||||||||||| ||||| ||||| || | || Sbjct 224906 AAGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGG 224847 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| | || || |||||| | || | ||| | ||| || Sbjct 224846 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCAC 224787 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCT 34973 |||| ||| |||||||| ||||||||||||||||| ||||||| Sbjct 224786 CTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 224743 >seq6 Length=1120801 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||| ||||| |||||||| ||| | || | || Sbjct 512037 AGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCC 511978 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| ||| ||||| || | || | |||||||| || Sbjct 511977 TCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCC 511918 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | || |||||| Sbjct 511917 TGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTC 511858 Query 34946 TTTCCCGTGAG 34956 |||||||| || Sbjct 511857 TTTCCCGTAAG 511847 Score = 84.2 bits (92), Expect = 1e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| |||||||| ||| | || | || || || |||||||||||||||| Sbjct 511651 CCTTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 511592 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||| || | || | |||||||| || | || || |||||| Sbjct 511591 TCAATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 511532 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 | || | || | ||| || || | || |||||||||||||| || Sbjct 511531 CGATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 511483 >seq5 Length=1443891 Score = 86.0 bits (94), Expect = 4e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| |||||||| ||| | || | || || || |||||||||||||||| Sbjct 854293 CCTTCTGGATGTTGTAGTCCGAAAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGA 854352 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 | ||||| ||||| || | || | ||||||||||| Sbjct 854353 TGAGTCGCTGCTGATCAGGGGGAATTCCCTCCTTGTC 854389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692629316617