Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq19 109 1e-18 >seq19 Length=309173 Score = 109 bits (120), Expect = 1e-18 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| ||| | || || | ||| || || || || ||||| || || ||||| || Sbjct 224965 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 224906 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| || || || || || || || || ||||| |||| || ||||| || || Sbjct 224905 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 224846 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || ||||| || || || || || || || ||| || || || Sbjct 224845 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 224786 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCT 82806 || | || || ||||| || || | |||||||| || |||| Sbjct 224785 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 224743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826659074577