Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 131 5e-25 seq19 127 6e-24 >seq6 Length=1120801 Score = 131 bits (144), Expect = 5e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 140500 TATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATAT 140559 || ||||| || || || | || ||||| |||||||| |||||||| || || || | Sbjct 512063 TAGTTTACTGCCCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGT 512004 Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619 | || || || | ||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 512003 TGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCT 511944 Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679 |||||||||| || || || |||||||| || || || || || || || || | ||| | Sbjct 511943 GATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGG 511884 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 ||| ||||| || || || | |||||||| || || Sbjct 511883 ATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 511847 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | ||||| || || ||||| || ||||| || ||||| Sbjct 511649 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 511590 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || |||||||||||||| || || || |||||||| || || || || || || || Sbjct 511589 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 511530 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || | ||| |||| ||||| || || || | |||||||| || || Sbjct 511529 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 511483 >seq19 Length=309173 Score = 127 bits (140), Expect = 6e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || || || || || || || || || || || ||||| || || || || ||||| || Sbjct 224965 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 224906 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||||| ||||| || || || || || || ||||| || || ||||||||||| ||| Sbjct 224905 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 224846 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || ||||| || || || || || || || || | ||||| | || || Sbjct 224845 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 224786 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733 ||||| || | ||||| || || || || ||||| || |||| Sbjct 224785 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 224743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253565189529