Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 7e-12 seq2 84.2 2e-11 >seq13 Length=590245 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 ||| || || |||||||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 19730 CGTTGAGGGTATCTTCTTTTCTGGATCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGAGG 19671 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||||| || ||| || || || ||| |||| || |||||||||| || || Sbjct 19670 ACTCATGCCTGGATTGACGTTTTCGAATGAGTTGATCTCGAGGGACGAGGGTCTTCA 19614 >seq2 Length=2005798 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 79672 TTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTC 79731 |||||||| ||||||| ||||| || ||||| || ||||||||||| || |||| | Sbjct 805662 TTGGAGATCATGGCGCACTGTTTGAGAGTATCGTAAATACCCTCGATCGAATCATCCTGC 805603 Query 79732 ATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAG 79787 || || |||| |||||| ||| | ||| |||| |||||||||||||| || Sbjct 805602 ATGGCCACCAAGAAGCAAGACGAAAGCTGGGGGTGAGGAGTACCGGCGTTGAATAG 805547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524505167920