Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xanthophyllomyces_20dendrorhous_20[genbank_20GCA_5F001600435.1_20201 6-03-01] 43 sequences; 19,108,479 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq19 93.3 3e-14 >seq19 Length=309173 Score = 93.3 bits (102), Expect = 3e-14 Identities = 170/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 23615 AGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACA 23674 |||| ||||| || ||||||||||| || || ||||| || || || || || | |||| Sbjct 224743 AGATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACA 224802 Query 23675 CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGC 23734 | | || | | || || || ||||| ||||| | || || ||||| |||| Sbjct 224803 CCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGC 224862 Query 23735 GTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTACAACAT 23792 | | || || ||||| || || || || || | || || ||| || |||||||||| Sbjct 224863 GACTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGG--ATTACAACAT 224920 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATC--AGCAGTTAAA 23850 || || |||||||| | || | || | ||||||||||||||| | || || ||| Sbjct 224921 CCAGAAGGAGTCCACCCTCCACCTCGTCCTTAGGTTGCGAGGAGGAGCCAAGAAGCGAAA 224980 Query 23851 GATGAA 23856 || ||| Sbjct 224981 GAAGAA 224986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009422861844