Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq779 149 5e-31
>seq779
Length=31144
Score = 149 bits (164), Expect = 5e-31
Identities = 288/415 (69%), Gaps = 15/415 (4%)
Strand=Plus/Minus
Query 20933 AACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC-A 20991
||| |||| | |||| | ||| | ||| || | ||| ||||| || ||||| || |
Sbjct 16087 AACATGGTCGGTGTAGATGTGCGTGTCGCCGATAAAGTGAACAAACTC-CCCGGTTTCCA 16029
Query 20992 GGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGA 21051
|||| || | ||| |||| | |||||||||| | |||| || ||||| ||||| |
Sbjct 16028 GGCCAGTCAGGTGCGCGACAATGTACGTCAGGATCGAGTAGGACGCAATGTTGAACGGAA 15969
Query 21052 CCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCC--CCGAGC 21109
| || || || ||||| | |||| |||||| ||| |||| ||||| || | |||
Sbjct 15968 CGCCAAGCCCGATGTCCCCAGACCGCTGGTAAAGCGCGCAGCTCAGCTTCCTGTCGGAGA 15909
Query 21110 CACGTAAAACTGACACAAAACGT--GACAAGGAGGGAGAGCCATCCGCGCGAGGTCCG-C 21166
|| |||||||| ||| ||| | || || || ||| ||||| | | | | | | |
Sbjct 15908 CA--TAAAACTGGAACAG--CGTTGGGCACGGCGGAAGAACCATCAGAG-GCGCTGCAAC 15854
Query 21167 GGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGG---CCGCCTGTTAATTAGATC 21223
||| |||||||| | | ||| || |||| |||||| || || || || ||
Sbjct 15853 GGGATTCCACGCACTGACAACCATCCGCCTGTCGTGGATGTTCCCGCTTTTTATCGTGTC 15794
Query 21224 CACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283
| ||| | ||||||| || ||||| | || ||||| || || | || ||||
Sbjct 15793 AATCACCTTTTGCAGCTGATCGACCCCTTCCCCGGTGTAGTCGGTGTAGCAGTCCTTGTA 15734
Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338
||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct 15733 CTCGGCCCCAAAATGCCTCCACTGGAAGCCGTACACAGGCCCGAGATCCCCCTCG 15679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427766996250960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |