Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=85208 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/229 (69%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 22756 GCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAA 22815 || || || || || || | || || || | ||||| || || |||||||||||||| Sbjct 27528 GCAGCAGTCGAGGGGATCTTCTTCTCGGGCGCGTTTGCTGCGATCTTCTGGCTGAAGAAG 27469 Query 22816 CGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTA 22875 || || |||| ||| || | || || |||||| |||| ||||| ||||| || | Sbjct 27468 CGGGGCCTGCTGCCTGGGCTGACCTTCTCGAACGAGCTGATCAGCCGGGACGAGGGAGTG 27409 Query 22876 CACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAGGACG-- 22933 ||| | |||||||| || ||||| | |||| || ||||| |||| ||||| | Sbjct 27408 CACCGCGACTTTGCGTGCCTGCTGATGCGGCACATCAAGAACAAGCCGTCGCAGGAGGTC 27349 Query 22934 ATGCACATCAAATCATATCTGATGCCGTTGACATTGAG-ACGGCTTTCT 22981 || || | | ||||| || || ||||| || ||| || ||||||| Sbjct 27348 ATCCAAAGC--ATCATCCGCGAGGCTGTTGAGATAGAGCACCGCTTTCT 27302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356226102061981