Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1675 91.5 1e-13 >seq1675 Length=15499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/155 (76%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGT-CGGGCACCACCCCG-T 71473 |||||||||||||| || ||| |||| ||||| ||||| | || |||||| |||||| | Sbjct 10847 ACGGTCATCCTGGACGGGAAGCCGTGCGGGTTCATGATTATGTCCGGGCA-GACCCCGCT 10905 Query 71474 CCTTGTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCG 71533 | ||| || |||||||||||||| | |||||| ||||| |||||| ||| ||| Sbjct 10906 CTCTGT-AAACGGCATGTCCTCCTGTGGCAGGACGATCCCGCAGACCCCCTTCTGC-CCG 10963 Query 71534 TGAATG-ACGCAAACTTGTCGCCCATCTCTGGGTG 71567 || || | ||||||||| || ||||| || || Sbjct 10964 TGCCTGCTGGAAAACTTGTCCCCAATCTCGGGCTG 10998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338757669742008