Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq944 84.2 2e-11 >seq944 Length=26795 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || |||||| | || ||||| || | || || ||| | || || |||| || || || Sbjct 9641 CACAATGCAGATCTTCGTAAAGACGCTGACAGGCAAAACAATCACACTCGAGGTGGATGC 9582 Query 24047 CAACGACACCATCGAGCAAGTCAA-ACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 ||| ||||||| ||||| |||||| || ||||| || || || || || | Sbjct 9581 ATCCGAATCCATCGACTCTGTCAAGACAAAA-ATCCAGGACAAGGAGGGAATCCCGCCAG 9523 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| ||||||||||| | || || ||||| |||||||| | |||| || || | Sbjct 9522 ATCAGCAGAGACTGATATTCGCTGGGAAGCAGCTCGAAGACGGAAGAACACTCTCGGACT 9463 Query 24166 ATAACATTCAAAAAGAATCTACA 24188 | ||||| ||||| ||||| ||| Sbjct 9462 ACAACATACAAAAGGAATCGACA 9440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926950787685