Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1207 87.8 2e-12 >seq1207 Length=23098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||||| || | ||||| | || || || ||| | Sbjct 18756 ATGCAGATCTTTGTGAAGACACTGACCGGAAAGACAATCACGCTTGAGGTTGACTCGGCC 18697 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || | |||||||| | ||| |||||| ||||||||||| || || || ||||| Sbjct 18696 GAGTCGATCGAGTCCGTCAAGGCAAAAATACAGGACAAAGAAGGAATCCCCCCGGACCAG 18637 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA--TGATCGCACTGTGGGCGATTACA 25176 ||||| | ||||| || || || || | || || || |||| | | || |||| Sbjct 18636 CAGCGACTGATTTTCGCAGGAAAGCAGCTGGAGGACGGGAGAACACTCTCG--GACTACA 18579 Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202 | || || || ||||| ||||| ||| Sbjct 18578 ACATCCAGAAGGAATCGACGCTCCAT 18553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318879393505