Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 87.8 2e-12
>seq1207
Length=23098
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||||| || | ||||| | || || || ||| |
Sbjct 18756 ATGCAGATCTTTGTGAAGACACTGACCGGAAAGACAATCACGCTTGAGGTTGACTCGGCC 18697
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| | |||||||| | ||| |||||| ||||||||||| || || || |||||
Sbjct 18696 GAGTCGATCGAGTCCGTCAAGGCAAAAATACAGGACAAAGAAGGAATCCCCCCGGACCAG 18637
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA--TGATCGCACTGTGGGCGATTACA 25176
||||| | ||||| || || || || | || || || |||| | | || ||||
Sbjct 18636 CAGCGACTGATTTTCGCAGGAAAGCAGCTGGAGGACGGGAGAACACTCTCG--GACTACA 18579
Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202
| || || || ||||| ||||| |||
Sbjct 18578 ACATCCAGAAGGAATCGACGCTCCAT 18553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433318879393505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |