Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq944 86.0 5e-12 >seq944 Length=26795 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || ||||| | || Sbjct 9637 ATGCAGATCTTCGTAAAGACGCTGACAGGCAAAACAATCACACTCGAGGTGGATGCATCC 9578 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| |||||| || ||||||||||| || || || ||||| Sbjct 9577 GAATCCATCGACTCTGTCAAGACAAAAATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 9518 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || ||||| || || || ||| | || || | || |||| || |||||| Sbjct 9517 CAGAGACTGATATTCGCTGGGAAGCAGCTCGAAGACGGAAGAACACTCTCGGACTACAAC 9458 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 9457 ATACAAAAGGAATCGAC 9441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719165643755