Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq601 147 4e-30
seq1173 89.7 1e-12
>seq601
Length=35606
Score = 147 bits (162), Expect = 4e-30
Identities = 211/292 (72%), Gaps = 4/292 (1%)
Strand=Plus/Plus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
||||||||| |||||||||| || || ||||||| || | ||| || |||||
Sbjct 30193 GACTTCATCAACAAGGAGCTGATCCTCTTCTCGCATGCAGACAATGTGCGGTCGATTCCG 30252
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT-GCCGCATTCAAGCG 218636
|| ||| || || |||||||| |||||| ||||| |||| || || ||||||||
Sbjct 30253 TCCGCGGTCGACGGGCTCAAGCCTGGGCAGCGGAAGATTCTCTACAGCTGC-TTCAAGCG 30311
Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696
||||||| || || |||||||| |||||| || ||||| | || ||||
Sbjct 30312 GAACCTGCAGGCCGAGATCAAGGTCGCGCAGTTTGTCGGGTATGTTGCGGAGCACTCTGC 30371
Query 218697 CTACCATCACGGTGAGCAGAGTC-TGCAGGGTGCCATTGTAGGCATGGCACAGGACTATG 218755
||||| ||||| ||||| || | |||| | ||||||| || ||||||||| ||| ||
Sbjct 30372 ATACCACCACGGGGAGCATAGCCTTGCATCG-ACCATTGTCGGGATGGCACAGAACTTTG 30430
Query 218756 TGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCG 218807
| ||||| |||||| |||| ||||| || ||||| ||||| || ||||
Sbjct 30431 TTGGCAGCAACAACGTGAATCTGCTGTCGCCAAACGGGCAGTTCGGGACTCG 30482
>seq1173
Length=23311
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||||||||||||||| || || |||| || |||||||||||||| |
Sbjct 18309 GCCCGGTTAGCTCAGTCGGTAGAGCGTGAGGCTTTTAACCTTAAGGTCGTGGGTTCGACC 18368
Query 142564 CCCACATCGGGC 142575
||||||||||||
Sbjct 18369 CCCACATCGGGC 18380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027814056862407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |