Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1 381 1e-100
seq655 223 7e-53
>seq1
Length=85208
Score = 381 bits (422), Expect = 1e-100
Identities = 605/862 (70%), Gaps = 14/862 (2%)
Strand=Plus/Minus
Query 42289 AGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGG 42348
|| |||| ||||||||| |||||||||| || | || || |||||| || ||||
Sbjct 27959 AGTACCACGACATCTGGGACATGTACAAGCAGTCCGAGGCGTCTTTCTGGACGGCAGAGG 27900
Query 42349 AGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGAAAAGT 42405
|||| |||||| || ||||| ||||| |||| ||| ||| | || |||||||
Sbjct 27899 AGATCGACCTGTCCCGGGACATGGCCGACTGGAGGGAGAAGCTGACCGACAACGAAAGAC 27840
Query 42406 TTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACC 42465
|| || | | || ||||| || || || ||||| |||||| |||||||
Sbjct 27839 ACTTTCTGTCGCATGTTCTTGCCTTTTTTGCAGCAAGCGACGGGATAGTCCTGGAGAACC 27780
Query 42466 TGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCC 42525
|| | ||||| | ||||| ||| | |||||||| || || ||||| ||||
Sbjct 27779 TGATCGAGCGGTTCTGCCAGGAGGTCCAGATCCCCGAGGCGCGGTGTTTTTACGGGTTCC 27720
Query 42526 AGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACA 42582
||||| || |||||| | ||||| ||||||||| | |||||| |||||||||
Sbjct 27719 AGATAATGATCGAGAACATCCACTCCGAGGTGTACAGCT---TGCTCATTGACACGTACA 27663
Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642
|| ||| ||| |||| || |||| ||||| || || || || | || | | |||
Sbjct 27662 TCGAGGACACCGCCGAGAAGGACAGGCTTTTCAATGCGATCGAAACACTTCCGTACGTCA 27603
Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702
|| ||||||| |||||| || ||| |||||| || || | || ||| || |
Sbjct 27602 AGGAGAAGGCCGACTGGACGATCAGGTGGATCAAGGACAGGGAGACGACCTTCCCCGTGC 27543
Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762
|||| || || | | || |||||||| ||||||||||||||||| || || | ||||
Sbjct 27542 GGCTTGTTGCAATCGCAGCAGTCGAGGGGATCTTCTTCTCGGGCGCGTTTGCTGCGATCT 27483
Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822
||||||| ||| || || | |||| || || |||||||||||||| || ||||||
Sbjct 27482 TCTGGCTGAAGAAGCGGGGCCTGCTGCCTGGGCTGACCTTCTCGAACGAGCTGATCAGCC 27423
Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882
|||||||||| |||| | |||||||| ||||| ||| | | | ||| ||| | |||
Sbjct 27422 GGGACGAGGGAGTGCACCGCGACTTTGCGTGCCTGCTGAT---GCGGCACATCAAGAACA 27366
Query 42883 AGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942
|||| ||| ||||| ||| ||||||| ||||| || ||||| ||| | |
Sbjct 27365 AGCCGTCGCAGGAGGTCATCCAAAGCATCATCCGCGAGGCTGTTGAGATAGAGCACCGCT 27306
Query 42943 TCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002
| ||| || | || ||||| || ||| |||| |||||| || | ||||||||| |||
Sbjct 27305 TTCTCGGCGAGGCCCTTCCCGTCTCGCTGATCGGGATGAACAACAAGCTCATGTGCCAGT 27246
Query 43003 ACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGAT-GGGTCTCAGCCGCCTCTACAAC 43061
||||| |||| |||||||||||||| || | | || | | | || | | ||||||
Sbjct 27245 ACATCGAGTATGTCGCCGACCATCTTCTCTCCGAGCTCGACTGCGAGAAG-TTATACAAC 27187
Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121
| | ||| |||||||||||||| ||||| ||| || || || |||||||| | |
Sbjct 27186 AGCGAGAACCCGTTCGACTTTATGGAAAACATTTCGCTGATCGGGAAAACCAACTTCTAC 27127
Query 43122 GAGAAGCGCGTCGCCGACTACC 43143
||||||||||| | || ||||
Sbjct 27126 GAGAAGCGCGTGTCGGAGTACC 27105
>seq655
Length=33610
Score = 223 bits (246), Expect = 7e-53
Identities = 1163/1813 (64%), Gaps = 105/1813 (6%)
Strand=Plus/Plus
Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820
|||| | | || | ||| ||||||||||||||||| || || | |||| ||| || |
Sbjct 28828 GCGGGCATCGTTCGCAGATAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAG 28887
Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880
|||||| |||||| | || || || || ||| ||| | | || ||||
Sbjct 28888 TGCATGCTCGTCAGGCGCGA-AT----AGGTT-GGCTCG-----GCAATGTA-GATGTTG 28935
Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTC 243940
|| |||||||| ||||||| | | ||| | || ||||| ||||| ||||| || ||||
Sbjct 28936 AGCGACTGGCTTTGGTCGATGTACGGCCCGCGGTCTGCTGCCATCTGGATGATGTTCTTC 28995
Query 243941 TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATG 244000
|| | ||||| || ||||| ||||| ||| || | | | |||| || |||||
Sbjct 28996 TGCGGGATCTCCCACACCGTCCGGTAGAGCCTCTTCAGCTCCGCCGGGATTGCTGCGATG 29055
Query 244001 TTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCC 244060
||| | || || |||| | || | ||| || | | |||||||||| |||
Sbjct 29056 CGCTGGATAGACCCGTTGTCTGCTATCATCTGTGTCTTTGTCTCCGCGTTCCACAG-CCC 29114
Query 244061 AAGCGCTC-CAGCGCCTCGACCAG-GTGCCTGTTCACCACCTGAAACTCTCCCGACAGCA 244118
| || | |||| || | || | ||| ||| |||| ||| ||||| || | || |
Sbjct 29115 ACGCCGGCACAGCTCCCGTATCATAGCGCC-GTTGACCATCTGGAACTCGCCAGCAAGAA 29173
Query 244119 CGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCT 244178
| || ||| |||||||||||| || |||||| | | |||||| | || || || |
Sbjct 29174 CCCGACGCACATAGAGGTTGCTGGTGTACGGCTCCACGGTCTCCGAGAACCCGAGGATGT 29233
Query 244179 GCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCT 244238
|| |||| || ||||||||||||| || || || ||||| || |||||| ||
Sbjct 29234 TCGACGTGGATGCGGTCGGCATGGGCGCAACAAGAAGCGAGTTCCGCAGCCCGTGCTCCT 29293
Query 244239 GGAT------GCGGAGTCTGAGCTCGTTCCAGTCC-CACATGCCCGAGAGGTCCTCGCGT 244291
||| || || ||| | ||| ||| | ||| | | |||
Sbjct 29294 TGATCTTCTCCCGCAGGCTGTCCCAGTTGTTCTCCTCTGTCGCCGGGGGAGTC------- 29346
Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351
| |||||||||||| ||||||| | ||| |||||| || ||| | ||| ||
Sbjct 29347 ---ACGCCCCACATGTCGCACTGCAGGAAGCCCCGGCTGACTGGAGACCCCGCATAGCTC 29403
Query 244352 GGGTAG-GGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGAT 244410
|| ||| | || || || || |||| || | |||||||| |||| ||| |
Sbjct 29404 GGATAGACGCCCTTCTCG-AGGCTGAGCTCGCACGAGGCCTCGAGGGCTGCGTGGTACAC 29462
Query 244411 GGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCAT 244470
|||||||| ||| | ||| ||| ||||| ||| || || ||| |||| || |
Sbjct 29463 CGTCTCGAATATCCGCCGGTTGATGGCGCGGCCCTCCTCGGAGTCGAACGGGA---CCTT 29519
Query 244471 CA--TCA-TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527
| ||| ||| || || || ||||||||||| |||| ||| | || | |||||||
Sbjct 29520 TAGCTCACAGAAAACATCCGCAAGTCCCTGCACACCGAGGCCAAGCGGGCGGTGTCGCAG 29579
Query 244528 GTTGGAGCGC-ATGGCTTCGGGCACG-GGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585
||| ||| | || |||| || | ||||| |||| |||||| | ||||| |||
Sbjct 29580 GTTCGAGGTCTTTGCCTTC--TCAAGCGGGTACCGGTTGTTGTCGATGATCTTGTCCAGG 29637
Query 244586 TTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCC 244645
|| || || |||| | ||| || | ||| |||| ||| || |
Sbjct 29638 TTCCGTGT-----TGCGATCTTTGTC-ACCTTGTGGAGAAGCGCGTAGTCG-AG-----C 29685
Query 244646 TCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGG-----CCAGGTTGCAG 244699
| | || ||||| | |||| || ||| | | | | || ||||||
Sbjct 29686 TTGCCG-------TCCTCGATAAAC-----GACGGCAGCCCAAGAGACCCGAGATTGCAG 29733
Query 244700 ACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG 244759
|| | | |||||||| |||||| ||| ||||| ||||| ||||| || | ||||
Sbjct 29734 ACCGAGATCTCCTCCGGCGACATGTACTCGACGATCTCCGTGCACAGGTTGCTCCCCTTG 29793
Query 244760 ATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAG 244819
|| || |||||||||||||| || | ||| |||||| ||||||||||| | ||| |
Sbjct 29794 ATTGTCCCCAGGTGCTGGTGGTTTGTCTTTCGGTTGCACGCGTCCTTGTACATGATGTAC 29853
Query 244820 GGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879
|| |||||||||| ||| ||| || | | ||| || | | ||| |
Sbjct 29854 GGGTTTCCGGTCTCGATCTGCGCGGTGACTATCTCCTGCCACAGCTTCTGCGCCGGCATT 29913
Query 244880 GTCCTGCGAGCCTTGCCC-TCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCC 244938
|| || | || |||| || |||||| || |||||| |||||||| || ||
Sbjct 29914 GT-CTTCTTTCCCAGCCCGTCCCGCTCGTACCGCTCGTACAGCGCCTCGAAGTCCTCTCC 29972
Query 244939 CCAGACCTCGTCTAGGCCGGGGCACGACG-CCGGGCACATGAGACTCCA-CTCGCCGCCG 244996
||| |||| || ||| ||| | || ||| || | || |||| ||| ||| |
Sbjct 29973 CCACGTCTCG-CTCAGCCCAGGCGCATCGTTCGGACAGAACAGCGTCCAGCTC-CCGTTG 30030
Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056
| || || | | |||| || ||||| || ||||| || || | | | ||||||| ||
Sbjct 30031 TTCTCCACGCGCCGCATAAACAGGTCTGGCATCCACAGCGCATAGGACAGGTCCC--GTG 30088
Query 245057 CTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114
| | | ||| ||| ||| ||||||||| | ||| | ||||| | || || | |
Sbjct 30089 CGCGGAACTCCTCCTTGCCCGTGTTCTTCTTGAGCGAGAGGAAGTCCAGCACATCCGCAT 30148
Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174
|||| ||||| | ||||| || | ||||| || | ||| | |||||||||||| ||
Sbjct 30149 GCCACGGCTCGAGGTAGATCGCAAACGCGCCCGGTCTTTTGCTTCCTCCCTGGTCC-GCA 30207
Query 245175 TCCTCTCGAGCGCGTTG-----AAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
| | || || ||||| |||| || || | || || || ||||| || |||
Sbjct 30208 TAC---CGTGC-CGTTGCATCAAAGACACGGAGCATCGGAACAATACCGTTTGAAACGCC 30263
Query 245230 GTTGGTGCCCTTGAT-GTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTC 245288
||| || ||| ||| || | | |||| ||| || |||| |||| || || | |
Sbjct 30264 GTTTGTTCCCCGGATAAGAGACCCGCTTG-CCCGGATGTTGTGGATGTTCAGCCCGATGC 30322
Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT--ATGCCCTCCAT 245346
| || | || || || || ||||| || || |||||| | || |||| |||
Sbjct 30323 CTGCGCCTGTCTGCGATATCAGCGCGCA-CT-GTGTCAGTGTCTTGTAGATCCCCTTCAT 30380
Query 245347 GCTGTC--CGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCAC 245404
||| || | ||| | |||| ||||||| ||| |||||| ||| |||
Sbjct 30381 CGAGTCGTCGGC--CATCGTCAGCACAAAGCAGCTGGAAAGCTGGTTGTTGTCTTTGCCG 30438
Query 245405 GAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTC 245464
| || | ||| || || | |||||| | |||| || | || | | | |||| |||
Sbjct 30439 GCATTCATCAGCGTCGGTGTTGCGTGGATGAAGTTCCGCCGAGACATGTGCTCGTATGTC 30498
Query 245465 TGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGC 245524
| ||| || |||| ||||||||||||| | || | ||| || |||||
Sbjct 30499 TCCAGCGCCTTCTCAATGTCCTCGCCGTGGATCTCAACTGCAACACGCATCAGCATGTGC 30558
Query 245525 TGGGGCGTCTCGA 245537
|| ||| ||||||
Sbjct 30559 TGCGGCCTCTCGA 30571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944318814077520
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