Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq601 98.7 1e-15 >seq601 Length=35606 Score = 98.7 bits (108), Expect = 1e-15 Identities = 211/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 176689 CTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGA 176748 ||| || ||||| |||||||| |||| | ||| |||| | || ||||||||||| || Sbjct 29835 CTTCAGGAGACTGGGCCAGAAATAGTCCAGCATGTTGATCAGCAGCCCCTTGATGTGCGA 29776 Query 176749 ACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATC 176808 ||||||| || || ||||| ||||| | | | || ||||| ||| | | Sbjct 29775 CCCGTCGTGGTCCTGGTCGGTCATTATCATCACATGCCCGTACCGCAGCGAGTCCGCGGT 29716 Query 176809 TTGATAGTCCTTACCCTGTTGAAGACCCAAG-ATCTTCTTGAGATCGTTGAACTCTTGGT 176867 || || ||||| || || || |||||| |||||||||| ||||| ||| || Sbjct 29715 CTGGTACTCCTTCTTTTGCTGCAG-CCCAAGAATCTTCTTGATGCTGTTGACCTCGGCGT 29657 Query 176868 TTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGA 176927 | | ||||| || ||| || || |||||| ||| || || ||||||| Sbjct 29656 TCTCCATCAGCTGCTTGGGCATGGCCTCCCGGACATTCAGGAGCTTTCCCCGCAGAGGGA 29597 Query 176928 AGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAG 176987 | || ||||||| |||| || || || | || ||||||| || |||| || |||| Sbjct 29596 ACACCCCGTAGTTTGCGCGCCCGACAACGGCCAGCCCCGCAATTGCAAGCGCCTTGGCAG 29537 Query 176988 AATCACCCTCTGT 177000 | || ||||| || Sbjct 29536 AGTCCCCCTCGGT 29524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728999723440