Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq655 131 2e-25
>seq655
Length=33610
Score = 131 bits (144), Expect = 2e-25
Identities = 519/807 (64%), Gaps = 15/807 (2%)
Strand=Plus/Plus
Query 106506 TGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 106565
||||||| | || || || |||| |||| | ||| || ||||||| | || ||||
Sbjct 29756 TGTACTCGACGATCTCCGTGCACAGGTTGCTCCCCTTGATTGTCCCCAGGTGCTGGTGGT 29815
Query 106566 TACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625
| ||||| ||||||||| |||||||| | ||||| || | || ||||| |||| |
Sbjct 29816 TTGTCTTTCGGTTGCACGCGTCCTTGTACATGATGTACGGGTTTCCGGTCTCGATCTGCG 29875
Query 106626 ACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGT--TGGCCCGTCCCT 106682
||| || ||| ||||| | || ||| | | || || | | | || | || |
Sbjct 29876 CGGTGACTATCTCCTGCCACAGCTTCTGCGCCGG---CATTGTCTTCTTTCCCAGCCCGT 29932
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| ||||||| ||| || || || || ||||| ||| || ||| || || |
Sbjct 29933 CCCGCTCGTACCGCTCGTACAGCGCCTCGAAGTCCTCTCCCCACGTCTCGCTCAGCCCAG 29992
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| || | || |||||||| || | ||| || | ||| || ||| ||| || |
Sbjct 29993 GCGCATCGTTCGGACAGAACAGCGTCCAGCTCCCGTTGTTCTCCACGCGCCGCATAAACA 30052
Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGG 106861
||||||| |||||||| | | | || || | | | | || | || | | || ||
Sbjct 30053 GGTCTGGCATCCACAGCGCATAGGACAGGTCCCGTGCGCGGAACTCCTCCTTGCCCGTGT 30112
Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921
| | | | | ||||| |||| | |||||| ||||| ||||| || |||| ||
Sbjct 30113 TCTTCTTG-AGCGAGAGGAAGTCCAGCACATCCGCATGCCACGGCTCGAGGTAGATCGCA 30171
Query 106922 ATAGATCCC----TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| | ||| ||| | | || | || | |||| || || || || | ||| ||
Sbjct 30172 AACGCGCCCGGTCTTTTG-CTTCCTCCCTGGTCCGCATACCGTGCCGTTGCATCAAAGAC 30230
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 107037
|| ||||| |||| |||||| | ||| || ||||| ||||| ||| |||| |
Sbjct 30231 ACGGAGCATCGGAACAATACCGTTTGAAACGCCGTTTGTTCCCCGGATAAGAGACCCGCT 30290
Query 107038 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 107097
|| | | | ||||||| || ||| || || | | || || || |||| ||
Sbjct 30291 TGCCCGGATGTTGTGGATGTTCAGCCCGATGCCTGCGCCTGTCTGCGATATCAGCGCGCA 30350
Query 107098 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 107157
|| || || || ||||| || || || ||||| || | | | | |||||
Sbjct 30351 CTGTGTCAGTGTCTTGTAGATCCCCTTCATCGAGTCGTCGGCCATCGTCAGCACAAAGCA 30410
Query 107158 ACTGGACATCTGCGGTCTTGG-TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216
||||| | ||| | | ||| | | || ||||| | || || ||||||||||| ||||
Sbjct 30411 GCTGGAAAGCTG-GTTGTTGTCTTTGCCGGCATTCATCAGCGTCGGTGTTGCGTGGATGA 30469
Query 107217 ACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 107276
| | | | ||||| | ||||||||||||| | |||||||| || |||||||
Sbjct 30470 AGTTCCGCCGAGACATGTGCTCGTATGTCTCCAGCGCCTTCTCAATGTCCTCGCCGTGGA 30529
Query 107277 TGCCGATGGCCACACGCATAAACATGT 107303
| | | || |||||||| | |||||
Sbjct 30530 TCTCAACTGCAACACGCATCAGCATGT 30556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968063789480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |