Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq732 358 9e-94
seq1207 134 2e-26
seq1 125 9e-24
>seq732
Length=31501
Score = 358 bits (396), Expect = 9e-94
Identities = 1036/1581 (66%), Gaps = 19/1581 (1%)
Strand=Plus/Minus
Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTA-TGGCAAAATGATCGTGTA 195361
|||| || ||| ||||||| || ||||| ||||| || ||| ||||| || || || ||
Sbjct 8956 TTGGAATAGATCTAGGAACAACATACTCGTGTGTCGG-GTACTGGCAGAACGAGCGGGTC 8898
Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421
||||| ||| |||| || || |||||||| || || || ||||| ||||| ||||| ||
Sbjct 8897 GAGATCATCACGAACGAGCAGGGAAACCGGACCACGCCGTCGTATGTTGCGTTTACGGAC 8838
Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481
| || ||||| | || || || || || || ||| | || |||||| | |||| ||
Sbjct 8837 AGCGAGCGTCTTATCGGGGAGGCGGCGAAGAACCAGGCCGCCATGAACGCGCTCAACACC 8778
Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCG-GATAAGAAAGTCCAAGACGA 195540
|| || || |||||||| || ||||| || |||| | || ||| | || || |||||
Sbjct 8777 GTGTTCGATGCGAAGCGGCTGATTGGGCGGC-GTTTCGGCGACAAGGAGGTGCAGGACGA 8719
Query 195541 TATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGT 195600
|| ||| ||||||| | | ||| || | | | || ||||| || | ||
Sbjct 8718 CATGAAGCACTGGTCGT-TCAAGGTGATTGAGAAGAAC--GACAAGCCGTGCATGGAGGT 8662
Query 195601 TGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGAT 195660
||| ||| | || |||| ||| || | | || || || || | ||| | ||||
Sbjct 8661 TGAGTTTAAGGGGGAGACGAAGAGCTTCACGGCGGAGGAGATCTCTGCGATGATCCTGAT 8602
Query 195661 TAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720
||||||||| || ||| || | | ||| || | | |||| | || ||||| ||
Sbjct 8601 GAAGATGAAGCAGGTTGCAGAGACGTACATCGGGCAGCCGGTGACCAAGGCGGTTGTCAC 8542
Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780
|| || || ||||||| || || || || |||||||| |||||||| | |||||
Sbjct 8541 CGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCGACGAAGGACGCGGGAATGATTGC 8482
Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840
| || | ||| | || ||||| || || || || || || ||||| || || ||
Sbjct 8481 CGAGCTGGAGGTTCTCCGGATCATCAACGAGCCCACTGCAGCCGCGATTGCGTACGGGCT 8422
Query 195841 GGACAAGAACAAGGAC--GAAG-ATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897
|||||| | | || |||| | || || | ||||| |||||||| || || ||
Sbjct 8421 CGACAAGCA---GCACTTGAAGGAGCGCAACGTTCTCATCTTCGATCTCGGCGGGGGCAC 8365
Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957
|| || || || || || || || | || || ||||| || ||||| || |||||
Sbjct 8364 CTTCGACGTGTCGCTGCTGGCAATCGACGAGGGGATCTTCGAGGTCAAGGCCACCGCTGG 8305
Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGA 196017
|| || ||||| || || || || ||||| || ||| | || || || || ||
Sbjct 8304 AGACACGCATCTCGGGGGAGAGGACTTCGACAACCGGCTTGTGGCGCACTTTTCCGAGGA 8245
Query 196018 GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAG 196077
|||| ||||||| ||||| ||| | | || || |||| || || |||| |
Sbjct 8244 GTTCAAGCGAAAGAGCAAGAAGGATCTGACCGGGTCGCCGCGGGCCCTCCGGAGGCTCCG 8185
Query 196078 GACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGAT 196137
|| || || ||||| ||||| ||||| ||||| || | | || | | | |||||
Sbjct 8184 CACCGCCTGCGAACGGGCCAAGCGAACGCTCTCGTCGTCCACCCAGGCCTCGATCGAGAT 8125
Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197
|| ||| ||||||| || || |||||||| ||| | || || || || || || || ||
Sbjct 8124 CGACTCGCTGTTTGAGGGGATCGACTTCTACACATCCATCACACGGGCCCGGTTCGAGGA 8065
Query 196198 GTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGC 196257
| | |||| || | || | | | | || | || |||| || || |||||
Sbjct 8064 GATCAACTACGACCTCTTCCAGTCGACACTCGCGCCGCTCGAGAAAGTTCTGCGCGACGC 8005
Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317
||| || ||| | || | || |||| ||||| || || || || || || ||
Sbjct 8004 CGCGATCGACAAGGCCTCCGTGTACGAGGTTGTGCTTGTTGGGGGGTCGACACGGATCCC 7945
Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377
|||||| || |||| |||| |||||| || || | ||| |||||||
Sbjct 7944 GAAGATCCAGAAGATCGTTTCGGATTTCTTCGGCGGAAAGGAGCCGAGCAAGGCGATCAA 7885
Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437
||| || || || ||||| || || ||| || ||||| || || || | || | |
Sbjct 7884 CCCCGACGAGGCTGTTGCATACGGCGCGAGTGTGCAGGCCGCGATACTGACGGGCG---A 7828
Query 196438 CAATAATAA--CGTC-CAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCT 196494
|| || || | || || |||| || || ||||| | || | || || || |
Sbjct 7827 CACGTCGAAGGCGACACAGGAGATTCTTCTGCTCGATGTCACGCCGCTCTCGCTCGGGAT 7768
Query 196495 TGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAA 196554
|| || || || || || ||||| | | || ||||||| || | ||| | ||
Sbjct 7767 CGAGACTGCAGGCGGGGTGATGACAACGCTGATCCCGCGGAACACGACCGTCCCGTCCAA 7708
Query 196555 GAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614
|||| | || || || || || |||| || || || || || | || || || |
Sbjct 7707 GAAGTCGAATGTGTTCTCGACCTACGCCGAGAACCAGCCGGGCGTGCTCATCCAGGTCTT 7648
Query 196615 TGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674
|| || || || | || | ||| ||| | || || || | ||||| || | ||
Sbjct 7647 CGAGGGCGAGCGAGCACGGACCTCGGACAACAACCTTCTCGGGAAGTTCGAGCTGTCTGG 7588
Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734
|||||| | ||||| || || ||||| | ||| ||||| || ||||| ||
Sbjct 7587 GATTCCGCCAGCACCGGCCGGCCAGCCGCAGATCGAGGTTCTGTTCGACATCGACGCCAA 7528
Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794
|| ||||| || || || |||| ||||||| | | || || | | ||||| |||
Sbjct 7527 CGGGATTCTGAATGTGACGGCTGTGGACAAGACGACAGGGAAGACCAACAAGATCACGAT 7468
Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854
|| || ||||||||||| || || |||||||| || || || ||||| ||||| |
Sbjct 7467 AACAAACGACAAGGGGCGTCTGTCGAAGGAGGAGATCGAGCGGATGGTCAGCGATGCCGC 7408
Query 196855 AAAGTACAGGGAAGAAGACGA 196875
||||||| | | || |||||
Sbjct 7407 GAAGTACAAGAAGGAGGACGA 7387
>seq1207
Length=23098
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || || ||||| || ||||| || |||||||| ||| |
Sbjct 18756 ATGCAGATCTTTGTGAAGACACTGACCGGAAAGACAATCACGCTTGAGGTTGACTCGGCC 18697
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| | ||||| | |||| || || || || || || ||||| || || || || |||
Sbjct 18696 GAGTCGATCGAGTCCGTCAAGGCAAAAATACAGGACAAAGAAGGAATCCCCCCGGACCAG 18637
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||||| ||||| || || || ||||| || || || | || ||| | || ||||||
Sbjct 18636 CAGCGACTGATTTTCGCAGGAAAGCAGCTGGAGGACGGGAGAACACTCTCGGACTACAAC 18577
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||| || || || || |||||| | || || || || ||
Sbjct 18576 ATCCAGAAGGAATCGACGCTCCATCTTGTTTTGAGACTGCGTGGCGG 18530
>seq1
Length=85208
Score = 125 bits (138), Expect = 9e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || || || || || || || |||||||||||||| || || |
Sbjct 80492 ATGCAGATCTTCGTCAAGACACTGACAGGGAAGACGATCACCCTCGAGGTCGATTCAGCC 80433
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| | ||||| |||| || || || || || || || || || || || || |||
Sbjct 80432 GAGTCGATCGAGTCGGTCAAGGCAAAAATCCAGGACAAAGAGGGAATCCCCCCAGACCAG 80373
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| |||| ||||| || || || ||||| || || ||| | || || | || ||||||
Sbjct 80372 CAGAGACTCATTTTCGCGGGAAAGCAGCTCGAGGACGGAAGAACACTGTCCGACTACAAC 80313
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
| || |||||||| || || || |||||||| | || ||||||||||
Sbjct 80312 ATCCAGAAGGAGTCGACGCTGCATCTTGTTCTCCGTCTGCGGGGTGGTG 80264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657848198395440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |