Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 93.3 3e-14
seq1 91.5 1e-13
>seq1207
Length=23098
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708
|| |||||||| | ||| ||| |||||| |||| |||| || || || |||||||||
Sbjct 18663 GACAAAGAAGGAATCCCCCCGGACCAGCAGCGACTGATTTTCGCAGGAAAGCAGCTGGAG 18604
Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|||| | |||| | ||||||||||||| || ||||| || ||| | || | || |||
Sbjct 18603 GACGGGAGAACACTCTCGGACTACAACATCCAGAAGGAATCGACGCTCCATCTTGTTTTG 18544
Query 107769 AGATTGCGAGGGGG 107782
||| |||| || ||
Sbjct 18543 AGACTGCGTGGCGG 18530
>seq1
Length=85208
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 107554 AAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTG 107613
||||||| || || ||||| || | ||||| || || || ||| |||| || | |
Sbjct 80494 AAATGCAGATCTTCGTCAAGACACTGACAGGGAAGACGATCACCCTCGAGGTCGATTCAG 80435
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||| | ||| ||| || ||| || || ||||| || | ||| || |
Sbjct 80434 CCGAGTCGATCGAGTCGGTCAAGGCAAAAATCCAGGACAAAGAGGGAATCCCCCCAGACC 80375
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
|||||||||| |||| ||||| || ||||| ||||||| | |||| || | |||||||
Sbjct 80374 AGCAGAGACTCATTTTCGCGGGAAAGCAGCTCGAGGACGGAAGAACACTGTCCGACTACA 80315
Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758
|||| || |||||||| ||| ||||
Sbjct 80314 ACATCCAGAAGGAGTCGACGCTGCA 80290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398868404515903
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |