Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq779 181 1e-40 >seq779 Length=31144 Score = 181 bits (200), Expect = 1e-40 Identities = 283/404 (70%), Gaps = 3/404 (1%) Strand=Plus/Minus Query 146929 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGG 146988 || |||| | ||||| ||||| ||| || | ||| ||||| ||||| | | ||| Sbjct 16086 ACATGGTCGGTGTAGATGTGCGTGTCGCCGATAAAGTGAACAAACTCCCCGGTTTCCAGG 16027 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || |||| ||| || || ||||| || || | ||||||| || |||||||| || || Sbjct 16026 CCAGTCAGGTGCGCGACAATGTACGTCAGGATCGAGTAGGACGCAATGTTGAACGGAACG 15967 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACG 147108 || || || |||||||| |||| |||||| ||| ||| |||| || ||||| || Sbjct 15966 CCAAGCCCGATGTCCCCAGACCGCTGGTAAAGCGCGCAGCTCAGCTTCCTGTCGGAGACA 15907 Query 147109 TAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTC 147168 ||||||||| |||| | |||||||||| || |||| ||| | |||| ||| Sbjct 15906 TAAAACTGGAACAGCGTTGGGCACGGCGGAAGAACCATCAGAGGCGCTGCAACGGGATTC 15847 Query 147169 CAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCC---TCTTAATCTCTTCGATAACC 147225 || || ||| |||| ||||||| | | ||||| | || ||| || || ||| Sbjct 15846 CACGCACTGACAACCATCCGCCTGTCGTGGATGTTCCCGCTTTTTATCGTGTCAATCACC 15787 Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285 |||||| || || || | || ||||| || ||||||| |||| |||| Sbjct 15786 TTTTGCAGCTGATCGACCCCTTCCCCGGTGTAGTCGGTGTAGCAGTCCTTGTACTCGGCC 15727 Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||||| ||||||||||||||||||||||| ||||| || || || Sbjct 15726 CCAAAATGCCTCCACTGGAAGCCGTACACAGGCCCGAGATCCCC 15683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583475403952800