Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq779 181 1e-40
>seq779
Length=31144
Score = 181 bits (200), Expect = 1e-40
Identities = 283/404 (70%), Gaps = 3/404 (1%)
Strand=Plus/Minus
Query 146929 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGG 146988
|| |||| | ||||| ||||| ||| || | ||| ||||| ||||| | | |||
Sbjct 16086 ACATGGTCGGTGTAGATGTGCGTGTCGCCGATAAAGTGAACAAACTCCCCGGTTTCCAGG 16027
Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048
|| |||| ||| || || ||||| || || | ||||||| || |||||||| || ||
Sbjct 16026 CCAGTCAGGTGCGCGACAATGTACGTCAGGATCGAGTAGGACGCAATGTTGAACGGAACG 15967
Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACG 147108
|| || || |||||||| |||| |||||| ||| ||| |||| || ||||| ||
Sbjct 15966 CCAAGCCCGATGTCCCCAGACCGCTGGTAAAGCGCGCAGCTCAGCTTCCTGTCGGAGACA 15907
Query 147109 TAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTC 147168
||||||||| |||| | |||||||||| || |||| ||| | |||| |||
Sbjct 15906 TAAAACTGGAACAGCGTTGGGCACGGCGGAAGAACCATCAGAGGCGCTGCAACGGGATTC 15847
Query 147169 CAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCC---TCTTAATCTCTTCGATAACC 147225
|| || ||| |||| ||||||| | | ||||| | || ||| || || |||
Sbjct 15846 CACGCACTGACAACCATCCGCCTGTCGTGGATGTTCCCGCTTTTTATCGTGTCAATCACC 15787
Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285
|||||| || || || | || ||||| || ||||||| |||| ||||
Sbjct 15786 TTTTGCAGCTGATCGACCCCTTCCCCGGTGTAGTCGGTGTAGCAGTCCTTGTACTCGGCC 15727
Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329
||||| ||||||||||||||||||||||| ||||| || || ||
Sbjct 15726 CCAAAATGCCTCCACTGGAAGCCGTACACAGGCCCGAGATCCCC 15683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583475403952800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |