Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq655 96.9 5e-15 >seq655 Length=33610 Score = 96.9 bits (106), Expect = 5e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 68391 GGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTA 68450 ||||||||| | || || ||||||||||| ||||| ||||| || |||| ||||| Sbjct 28824 GGATGCGGGCATCGTTCGCAGATAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTA 28883 Query 68451 GAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTG 68510 ||| ||||| || || || ||||| |||| ||||| || | || || | ||| || Sbjct 28884 GAAGTGCATGCTCGTCAGGCGCGAATAGGTTGGCTCGGCAATGTAGATGTTGAGCGACTG 28943 Query 68511 ACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAAT 68570 ||||| |||||| | | || | ||||| ||||| | || || |||| || || || Sbjct 28944 GCTTTGGTCGATGTACGGCCCGCGGTCTGCTGCCATCTGGATGATGTTCTTCTGCGGGAT 29003 Query 68571 TTCCCA 68576 ||||| Sbjct 29004 CTCCCA 29009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686893971356280