Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq655 120 4e-22
>seq655
Length=33610
Score = 120 bits (132), Expect = 4e-22
Identities = 521/814 (64%), Gaps = 15/814 (2%)
Strand=Plus/Plus
Query 111279 TGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 111338
||||||| | || || || || | |||| | ||| || ||||||| | || ||||
Sbjct 29756 TGTACTCGACGATCTCCGTGCACAGGTTGCTCCCCTTGATTGTCCCCAGGTGCTGGTGGT 29815
Query 111339 TACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398
| |||| ||||||||| |||||||| | ||||| || | || ||||| |||| |
Sbjct 29816 TTGTCTTTCGGTTGCACGCGTCCTTGTACATGATGTACGGGTTTCCGGTCTCGATCTGCG 29875
Query 111399 ATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGT--TGGCCCGTCCCT 111455
||| || ||| ||| | | || ||| | | || || | | | || | || |
Sbjct 29876 CGGTGACTATCTCCTGCCACAGCTTCTGCGCCGG---CATTGTCTTCTTTCCCAGCCCGT 29932
Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515
|| ||||||| ||| || || || || ||||| ||| || ||| || || |
Sbjct 29933 CCCGCTCGTACCGCTCGTACAGCGCCTCGAAGTCCTCTCCCCACGTCTCGCTCAGCCCAG 29992
Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575
| || | || |||||||| || | ||| || | ||| || ||| ||| || |
Sbjct 29993 GCGCATCGTTCGGACAGAACAGCGTCCAGCTCCCGTTGTTCTCCACGCGCCGCATAAACA 30052
Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGG 111634
||||||| |||||||| | | | || || | | | | || | || | | || ||
Sbjct 30053 GGTCTGGCATCCACAGCGCATAGGACAGGTCCCGTGCGCGGAACTCCTCCTTGCCCGTGT 30112
Query 111635 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 111694
| | | | | ||||| |||| | |||||| ||||| ||||| || |||| ||
Sbjct 30113 TCTTCTTG-AGCGAGAGGAAGTCCAGCACATCCGCATGCCACGGCTCGAGGTAGATCGCA 30171
Query 111695 ATAGATCCC----TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 111750
| | ||| ||| | | || | || | |||| || || || || | ||| ||
Sbjct 30172 AACGCGCCCGGTCTTTTG-CTTCCTCCCTGGTCCGCATACCGTGCCGTTGCATCAAAGAC 30230
Query 111751 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 111810
|| ||||| |||| |||||| | ||| || ||||| ||||| ||| |||| |
Sbjct 30231 ACGGAGCATCGGAACAATACCGTTTGAAACGCCGTTTGTTCCCCGGATAAGAGACCCGCT 30290
Query 111811 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 111870
|| | | | ||||||| || ||| || || | | || || || |||| ||
Sbjct 30291 TGCCCGGATGTTGTGGATGTTCAGCCCGATGCCTGCGCCTGTCTGCGATATCAGCGCGCA 30350
Query 111871 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 111930
|| || || || ||||| || || || ||||| || | | | | |||||
Sbjct 30351 CTGTGTCAGTGTCTTGTAGATCCCCTTCATCGAGTCGTCGGCCATCGTCAGCACAAAGCA 30410
Query 111931 ACTGGACATCTGCGGTCTTGG-TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989
||||| | ||| | | ||| | | || ||||| | || || ||||||||||| ||||
Sbjct 30411 GCTGGAAAGCTG-GTTGTTGTCTTTGCCGGCATTCATCAGCGTCGGTGTTGCGTGGATGA 30469
Query 111990 ACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049
| | | | ||||| | ||||||||||||| | |||||||| || |||||||
Sbjct 30470 AGTTCCGCCGAGACATGTGCTCGTATGTCTCCAGCGCCTTCTCAATGTCCTCGCCGTGGA 30529
Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
| | | ||| || ||||| | ||||| ||| ||
Sbjct 30530 TCTCAACTGCAACACGCATCAGCATGTGCTGCGG 30563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628018442359200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |