Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 9e-24
>seq1
Length=85208
Score = 125 bits (138), Expect = 9e-24
Identities = 281/413 (68%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796
|| ||||||||| ||||||| || |||||| || || || |||||||| || ||
Sbjct 27116 ACGCGCTTCTCGTAGAAGTTGGTTTTCCCGATCAGCGAAATGTTTTCCATAAAGTCGAAC 27175
Query 129797 GGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGAC 129855
||||||| ||| | || | || ||| || | || ||| ||| | || | |||
Sbjct 27176 GGGTTCTCGCTGTTGTATAACTTCTCGCAGTCGAG-CTCGGAGAGAAGATGGTCGGCGAC 27234
Query 129856 GTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGA-GCG 129914
||||| ||||||| |||| || | |||||| ||||| || | | |||| | |
Sbjct 27235 ATACTCGATGTACTGGCACATGAGCTTGTTGTTCATCCCGATCAGCG-AGACGGGAAGGG 27293
Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974
| || || || | | ||| || || ||||| || || | |||| || ||| ||
Sbjct 27294 CCTCGCCGAGAAAGCGGTGCTCTATCTCAACAGCCTCGCGGATGATGCTTTGGATGACCT 27353
Query 129975 CCGTGCCAGGTCTATTGCGCAAAGT----CTTGAAGAGTTCCACGGCAAACTCCTGGTGG 130030
|| ||| | | || | | | || | | | || |||| |||| || ||||
Sbjct 27354 CC-TGCGACGGCTTGTTCTTGATGTGCCGCATCAGCAGG--CACG-CAAAGTCGCGGTGC 27409
Query 130031 AGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGC 130090
| |||||||| ||| ||| || || ||||||||| ||| || |||| || ||||||
Sbjct 27410 ACTCCCTCGTCCCGGCTGATCAGCTCGTTCGAGAAGGTCAGCCCAGGCAGCAGGCCCCGC 27469
Query 130091 TTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||||||| |||||| |||||| ||| | ||| ||||||||||||||||| ||
Sbjct 27470 TTCTTCAGCCAGAAGATCGCAGCAAACGCGCCCGAGAAGAAGATCCCCTCGAC 27522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618421849530120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |