Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq944 104 1e-17
>seq944
Length=26795
Score = 104 bits (114), Expect = 1e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|||||||||||||||| ||| | ||||| || |||||||| ||||| || || ||
Sbjct 9411 CCGCCTCTAAGACGCAGCACAAGGTGGAGTGTCGATTCCTTTTGTATGTTGTAGTCCGAG 9470
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||||| ||||||| || || || || || ||||| | | ||| || || |||||
Sbjct 9471 AGTGTTCTTCCGTCTTCGAGCTGCTTCCCAGCGAATATCAGTCTCTGCTGATCTGGCGGG 9530
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTG-TGTCTTCG---CTCTC 34655
| |||||||||||| ||| |||||| || || | | | | || |||| ||
Sbjct 9531 ATTCCCTCCTTGTCCTGGAT-TTTTGTCTT---GACAGAGTCGATGGATTCGGATGCATC 9586
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| || | || || ||||| || || | ||| || || || ||||||||
Sbjct 9587 CACCTCGAGTGTGATTGTTTTGCCTGTCAGCGTCTTTACGAAGATCTGCAT 9637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314722975630391
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |