Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1207 86.0 5e-12 >seq1207 Length=23098 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || || | ||| ||||| || || || || || || || | ||||||| |||| Sbjct 18545 AAAACAAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGTGTTCTCCCGTCC 18604 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || ||||| || || || || || || ||||||||||| | ||| | | ||||||||| Sbjct 18605 TCCAGCTGCTTTCCTGCGAAAATCAGTCGCTGCTGGTCCGGGGGGATTCCTTCTTTGTCC 18664 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||||| |||| | | | | || ||| ||| || || || | |||||| | Sbjct 18665 TGTATTTTTGCCTTGACGGACTCGATCGACTCGGCCGAGTCAACCTCAAGCGTGATTGTC 18724 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| ||||| || || |||||||| ||||| Sbjct 18725 TTTCCGGTCAGTGTCTTCACAAAGATCTGCAT 18756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429536559004751