Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq944 82.4 5e-11
>seq944
Length=26795
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/202 (70%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| || || || || || ||||| ||||| ||||| || || | |
Sbjct 9638 AATGCAGATCTTCGTAAAGACGCTGACAGGCAAAACAATCACACTCGAGGTGGATGCATC 9579
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| | | || | | || ||||||| | ||||| || || | ||||||||||
Sbjct 9578 CGAATCCATCGACTCTGTCAAGACAAAAA-TCCAGGACAAGGAGGGAATCCCGCCAGATC 9520
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTA 23786
| ||| | | ||||| || || || || || ||||||| | | |||| | || | ||
Sbjct 9519 AGCAGAGACTGATATTCGCTGGGAAGCAGCTCGAAGACGGAAGAACACTCTCGG--ACTA 9462
Query 23787 CAACATACAAAAAGAGTCCACA 23808
|||||||||||| || || |||
Sbjct 9461 CAACATACAAAAGGAATCGACA 9440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338002485637316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |