Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016- 11-10] 1,727 sequences; 5,620,147 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq944 82.4 5e-11 >seq944 Length=26795 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || || || || ||||| ||||| ||||| || || | | Sbjct 9638 AATGCAGATCTTCGTAAAGACGCTGACAGGCAAAACAATCACACTCGAGGTGGATGCATC 9579 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || | | || | | || ||||||| | ||||| || || | |||||||||| Sbjct 9578 CGAATCCATCGACTCTGTCAAGACAAAAA-TCCAGGACAAGGAGGGAATCCCGCCAGATC 9520 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTA 23786 | ||| | | ||||| || || || || || ||||||| | | |||| | || | || Sbjct 9519 AGCAGAGACTGATATTCGCTGGGAAGCAGCTCGAAGACGGAAGAACACTCTCGG--ACTA 9462 Query 23787 CAACATACAAAAAGAGTCCACA 23808 |||||||||||| || || ||| Sbjct 9461 CAACATACAAAAGGAATCGACA 9440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002485637316