Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=85208
Score = 95.1 bits (104), Expect = 1e-14
Identities = 292/449 (65%), Gaps = 2/449 (0%)
Strand=Plus/Plus
Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607
|||||||| || | |||| || ||||| | ||| ||||| ||||| || || || |
Sbjct 27392 CACGCAAAGTCGCGGTGCACTCCCTCGTCCCGGCTGATCAGCTCGTTCGAGAAGGTCAGC 27451
Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667
|| |||| | || | ||| || ||||| || || || ||||| | || || |||||
Sbjct 27452 CCAGGCAGCAGGCCCCGCTTCTTCAGCCAGAAGATCGCAGCAAACGCGCCCGAGAAGAAG 27511
Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGC-TGGCTTTGTCTTT 4726
|| || || || || || | || || || | | || | | | | | | |||| ||
Sbjct 27512 ATCCCCTCGACTGCTGCGATTGCAAC-AAGCCGCACGGGGAAGGTCGTCTCCCTGTCCTT 27570
Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786
||||| | | | ||||| || || | ||| ||| |||||| ||| | || || ||
Sbjct 27571 GATCCACCTGATCGTCCAGTCGGCCTTCTCCTTGACGTACGGAAGTGTTTCGATCGCATT 27630
Query 4787 AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846
|| | | || || | ||| | || || ||||| || || | ||| ||||
Sbjct 27631 GAAAAGCCTGTCCTTCTCGGCGGTGTCCTCGATGTACGTGTCAATGAGCAAGCTGTACAC 27690
Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906
|| || || || || || || ||||| || |||||||| || | || || | |
Sbjct 27691 CTCGGAGTGGATGTTCTCGATCATTATCTGGAACCCGTAAAAACACCGCGCCTCGGGGAT 27750
Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966
|| || || | || || | || | | ||| || ||||| ||||| || |||||
Sbjct 27751 CTGGACCTCCTGGCAGAACCGCTCGATCAGGTTCTCCAGGACTATCCCGTCGCTTGCTGC 27810
Query 4967 AAAAAACGCCAAAACATGAGATATAAAGT 4995
|||||| || | |||||| || | |||||
Sbjct 27811 AAAAAAGGCAAGAACATGCGACAGAAAGT 27839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427040611540091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |