Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphiamblys_20sp._20WSBS2006_20[genbank_20GCA_5F001875675.1_202016-
11-10] 1,727 sequences; 5,620,147 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 2e-21
seq1207 109 1e-18
>seq1
Length=85208
Score = 118 bits (130), Expect = 2e-21
Identities = 162/220 (74%), Gaps = 10/220 (5%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| |||||||| || || ||||| || ||||||||||| |||| | ||||| || ||
Sbjct 80280 GAGAACAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTTCTTCCGTC 80339
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || ||||| || || ||||||||||| | | |||||| || ||
Sbjct 80340 CTCGAGCTGCTTT--CCCGCGAAAATGAGTCTCTGCTGGTCTGGGGGGATTCCCTCTTTG 80397
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTA-CG-CT-GTCTGAACTCTCTACTTCAAGAGTA 152066
|| || |||||| ||||| | ||| | || || | ||||| || || || || ||
Sbjct 80398 TCCTGGATTTTTGCCTTGACCGACTCGATCGACTCGGCTGAA---TCGACCTCGAGGGTG 80454
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
|| || || || || || ||||| ||||||| ||||||||
Sbjct 80455 ATCGTCTTCCCTGTCAGTGTCTTGACGAAGATCTGCATTT 80494
>seq1207
Length=23098
Score = 109 bits (120), Expect = 1e-18
Identities = 162/223 (73%), Gaps = 10/223 (4%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||| || || || || || ||||||||||| || | | ||||||
Sbjct 18539 AGTCTCAAAACAAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGTGTTCTC 18598
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|| || || || ||||| || ||||| || || | ||||||||||| | ||||||||
Sbjct 18599 CCGTCCTCCAGCTGCTTT--CCTGCGAAAATCAGTCGCTGCTGGTCCGGGGGGATTCCTT 18656
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTA-CG-CT-GTCTGAACTCTCTACTTCAA 152061
| || || || |||||| ||||| | ||| | || || | | || || || ||||
Sbjct 18657 CTTTGTCCTGTATTTTTGCCTTGACGGACTCGATCGACTCGGCCGA---GTCAACCTCAA 18713
Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || || || || || |||||||| |||| ||||||
Sbjct 18714 GCGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAGATCTGCAT 18756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153795269190817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |