Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq233 107 2e-18 >seq233 Length=4434 Score = 107 bits (118), Expect = 2e-18 Identities = 299/457 (65%), Gaps = 20/457 (4%) Strand=Plus/Minus Query 18788 GGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 |||||| | || || |||||||||| || ||| |||||| ||| || | |||| Sbjct 1717 GGGGGATTTAGGTCCTGTTTACGGCTTTCAATGGCGACATTATGGTGCTAATTATACGAC 1658 Query 18848 CTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAAT 18907 |||| || | |||||| | ||||||| |||||| |||||| |||||| || || Sbjct 1657 CTGTGAAGAAGACTATTCCAATAAAGGAATTGATCAGTTGCAAAATGTTATTAATGAGAT 1598 Query 18908 TAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCC 18967 || | || ||||| ||| || || | ||| | || |||||||||| || | Sbjct 1597 AAAGAATAATCCAGATAGCAGAAGATTAATTGTTGTTTCATGGAATCCAA----TA-CAG 1543 Query 18968 CTTAA-----TGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGG- 19021 ||||| ||| | |||||||| || |||| |||||| | ||| |||| || Sbjct 1542 CTTAAAGAGATGGCTTTGCCTCCATGCCATTTATTATTCCAGTTTAATGTTACAAATGGA 1483 Query 19022 ----TGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGT 19077 |||||| | || |||| || ||||| || ||| | || | || |||| | Sbjct 1482 TTTTTGAATTGTGCTT-----TATATCAAAGATCAGGTGATGTTGGATTAGGTATACCTT 1428 Query 19078 TCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAA 19137 | || || ||| | ||||| | | |||||||| |||| || |||| | || || Sbjct 1427 TTAATATAGCTAGTTATGCCATGTTAACCTACATGATAGCCTATCTTACTGATCTACAAC 1368 Query 19138 CCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTT 19197 | || || || | ||| || | |||||||||||||| |||||| | ||| | Sbjct 1367 CTGGTGAATTTGTACATTTTATTGCAGATGCACATATTTATACCAATCATGTTGATCAAT 1308 Query 19198 TAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCC 19234 ||| | ||| || | || | || | |||||||| Sbjct 1307 TAAGTGAACAGATACTTAGAACTCCTTATCCTTTTCC 1271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399462969316215