Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2381 87.8 2e-12 seq7557 82.4 7e-11 >seq2381 Length=3349 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || |||| ||| | || || || || ||||| || ||||| | Sbjct 870 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 811 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || |||||| || |||||||| | || |||||| Sbjct 810 AGATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCA 751 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||||||||| ||||| || |||||||| ||||| | || | | || ||||| Sbjct 750 ACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAA 691 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || ||| ||| ||||| |||| || ||||| ||||||| Sbjct 690 CATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGAGG 643 >seq7557 Length=3014 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || |||| ||| | || || || || ||||| || ||||| | Sbjct 2557 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 2498 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || |||||| || |||||||| | || |||||| Sbjct 2497 AGATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCA 2438 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||||||||| ||||| || |||||||| ||||| | || | | || ||||| Sbjct 2437 ACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAA 2378 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || ||| ||| |||| |||| || ||||| ||||||| Sbjct 2377 CATCCAAAAAGAAAGTACCATTCATTTGGTTCTAAGATTAAGAGGAGG 2330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428292008152685