Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq233 102 6e-17 seq2812 100 2e-16 >seq233 Length=4434 Score = 102 bits (112), Expect = 6e-17 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 97050 ATCAATGTGATTCACATAAATGTGAGCATCTCC--TAAAGTGTGAATAAATTCTCCAGGA 97107 ||||| ||||| |||||| || |||||| | |||| ||| | |||||| ||||| Sbjct 1312 ATCAACATGATTGGTATAAATATGTGCATCTGCAATAAAATGT--ACAAATTCACCAGGT 1369 Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167 || |||||| | || ||| ||||| | ||||| | | ||| ||||| || |||||| Sbjct 1370 TGTAGATCAGTAAGATAGGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAA 1429 Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCA 97227 || | |||| ||| | |||| |||||||||||||||| ||| | ||||| Sbjct 1430 GGTATACCTAATCCAACATCACCTGATCTTTGATATAAAGCACAATTCAAAAATCCATTT 1489 Query 97228 CACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 |||| |||||| |||| ||| || || ||||| ||||| Sbjct 1490 GTAACATTAAACTGGAATAATAAATGGCATGGAGGCAAAGCCAT 1533 >seq2812 Length=2852 Score = 100 bits (110), Expect = 2e-16 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 97050 ATCAATGTGATTCACATAAATGTGAGCATCTCC--TAAAGTGTGAATAAATTCTCCAGGA 97107 ||||| ||||| |||||| || |||||| | |||| ||| | |||||| ||||| Sbjct 2577 ATCAACATGATTGGTATAAATATGTGCATCTGCAATAAAATGT--ACAAATTCACCAGGT 2634 Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167 || |||||| | || ||| ||||| | ||||| | | ||| ||||| || |||||| Sbjct 2635 TGTAGATCAGTAAGATAGGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAA 2694 Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAA 97205 || | |||| ||| | |||| |||||||||||||||| Sbjct 2695 GGAATACCTAATCCAACATCACCTGATCTTTGATATAA 2732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346748383874390