Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq932 102 2e-16 seq4968 87.8 3e-12 >seq932 Length=2997 Score = 102 bits (112), Expect = 2e-16 Identities = 144/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511 ||||| || ||||| || ||||||| ||| ||||||||| ||| | || ||||| Sbjct 1937 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 1878 Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGT 189571 |||||||| || | |||| |||||| | |||||| ||||| || || | | || Sbjct 1877 TATTGGGCCAAAACATTACTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 1819 Query 189572 A-TCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTG 189630 | | |||||||| | ||||| | | || || | ||||| || |||||| |||| Sbjct 1818 ATTTTATTTGAATGATAAGTATTCAATTGATGGAAATGATCCAAATGGATACCTAGGAAT 1759 Query 189631 TATGTGGTCTATTTGCGGAT 189650 ||||||||||||||| |||| Sbjct 1758 TATGTGGTCTATTTGTGGAT 1739 >seq4968 Length=2160 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511 ||||| || ||||| || ||||||| ||| ||||||||| ||| | || ||||| Sbjct 307 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 248 Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGT 189571 |||||||| || | | || |||||| | |||||| ||||| || || | | || Sbjct 247 TATTGGGCCAAAACATTGCTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 189 Query 189572 A-TCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTG 189630 | | |||||||| | || || | || || | ||||| || |||||| |||| Sbjct 188 ATTTTATTTGAATGATAAATATTCTATTGATGGAAATGATCCAAATGGATACCTAGGAAT 129 Query 189631 TATGTGGTCTATTTGCGGAT 189650 ||||||||||||||| |||| Sbjct 128 TATGTGGTCTATTTGTGGAT 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923099552757080