Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06]
8,427 sequences; 13,823,425 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq7557 84.2 3e-11
seq2381 84.2 3e-11
>seq7557
Length=3014
Score = 84.2 bits (92), Expect = 3e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||||||| | | |||||||| | || || || ||||| || ||||| ||||
Sbjct 2329 TCCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGA 2388
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| | | |||| || || || |||||||| || || |||| || || || | ||
Sbjct 2389 AAGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGG 2448
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||||| ||| |||| | ||||| || | | || || | ||| |
Sbjct 2449 TATTCCTTCTTTGTCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTA 2507
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | || || || || || || || ||||| |||||||||||||||
Sbjct 2508 CCTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 2557
>seq2381
Length=3349
Score = 84.2 bits (92), Expect = 3e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||||||| | | |||||||| | || || || ||||| || ||||| ||||
Sbjct 642 TCCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGA 701
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| | | |||| || || || |||||||| || || |||| || || || | ||
Sbjct 702 AAGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGG 761
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||||| ||| |||| | ||||| || | | || || | ||| |
Sbjct 762 TATTCCTTCTTTGTCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTA 820
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | || || || || || || || ||||| |||||||||||||||
Sbjct 821 CCTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571757366163560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |