Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq7255 111 2e-19 seq6159 93.3 6e-14 seq2511 93.3 6e-14 >seq7255 Length=3735 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 73950 AATAGACAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGAT 74009 || |||||||| | |||||||||| || |||||||| | |||||||| | ||||| Sbjct 2348 AACAGACAACCAAGTTTACATAAAATGTCTATGATGGCACACAGAGTTAAAGTAATGGAA 2289 Query 74010 GTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGA 74069 | || || |||| | |||||||| | |||| ||| || ||||||||||||||||| Sbjct 2288 GGAATCACATTTAGACTTAATCTTTCTGCCACTTCACCCTACAATGCAGATTTTGATGGT 2229 Query 74070 GATGAAATGAATGCTCATGCGCCTCAATC 74098 |||||||||||| ||| ||| ||||| Sbjct 2228 GATGAAATGAATATGCATATGCCACAATC 2200 >seq6159 Length=5147 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 73956 CAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGATGTAAAA 74015 ||||| | |||||||||| || |||||||| | |||||||| | ||||| | || Sbjct 4490 CAACCAAGTTTACATAAAATGTCTATGATGGCACACAGAGTTAAAGTAATGGAAGGAATC 4549 Query 74016 ACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGAGATGAA 74075 | |||| | |||||||| | |||| ||| || |||||||| |||||||| |||||| Sbjct 4550 ATATTTAGACTTAATCTTTCTGTCACTTCACCCTACAATGCAGACTTTGATGGTGATGAA 4609 Query 74076 ATGAAT 74081 |||||| Sbjct 4610 ATGAAT 4615 >seq2511 Length=3308 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 73956 CAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGATGTAAAA 74015 ||||| | |||||||||| || |||||||| | |||||||| | ||||| | || Sbjct 559 CAACCAAGTTTACATAAAATGTCTATGATGGCACACAGAGTTAAAGTAATGGAAGGAATC 618 Query 74016 ACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGAGATGAA 74075 | |||| | |||||||| | |||| ||| || |||||||| |||||||| |||||| Sbjct 619 ATATTTAGACTTAATCTTTCTGTCACTTCACCCTACAATGCAGACTTTGATGGTGATGAA 678 Query 74076 ATGAAT 74081 |||||| Sbjct 679 ATGAAT 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679742790050640