Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1856 149 6e-31 seq166 95.1 1e-14 >seq1856 Length=1984 Score = 149 bits (164), Expect = 6e-31 Identities = 398/606 (66%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 || ||||| |||| || ||| |||| || | || ||| | ||||| ||| ||||| Sbjct 872 AGGTTTGTTTTGTTCCCTATTAAATACCCCAAAATATGGGAAATGTATAAATTAGCAGAG 931 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 | |||||||||||| || ||||| || | || ||| | || ||||| | Sbjct 932 GGATCGTTTTGGACAACTGAGGAAGTTGATTTAACTGTTGATAAGTTTGAATGGGAAAAC 991 Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713 | || ||| ||| ||||||||||||||||| || | || ||||| || ||||| Sbjct 992 AGATTGAATGAAGATGAAAGAAATTTTATTAAACATGTACTCGCATTTTTTGCGGCATCT 1051 Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773 ||||||||||||| || ||| ||| | ||||||| || || || || | | || Sbjct 1052 GATGGTATTGTTATGGAAAATCTGGCTGTAAGATTTGCAAGTGAGGTTCAGATACCAGAA 1111 Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833 || ||| ||||| || ||| | || || ||| | ||||| || |||||||| Sbjct 1112 GCAAGAGCATTTTATTCCTTCCAAATAGCTATGGAAGTAATCCATTCTGAGATGTATTCT 1171 Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATC 57893 | || || || || || || || ||||| ||| || || || || | Sbjct 1172 TTGCTTATTGAAGTGTTGGTTTCTGATTCTGAAGAGAAGAATAGGCTATTTAATGCAGTT 1231 Query 57894 GAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC 57953 |||||| || || || ||||| || ||| || | || ||| | || | Sbjct 1232 TCAACAATACCTATAGTCAGGAAAAAGGCCGAATGGGCATTAAA----ATACATTGCTTC 1287 Query 57954 A-CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 | || | || ||| ||||||||||| || || || || ||||| || |||||| Sbjct 1288 AGATTCCCCCTTTAGCGATAGGCTAATCGCCTTTGCAGCTGTAGAAGGAATTTTCTTTAG 1347 Query 58013 GGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTT 58072 || |||||| | || |||||| | |||||| | || ||||||| || || || || Sbjct 1348 TAGCTCCTTTGCTTCTATTTTTTGGCTAAAGAAAAGAGGATTGATGCCAGGTCTTACATT 1407 Query 58073 TAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTA 58132 | || || || ||||| | || |||||| ||| ||||||||||| || || | | Sbjct 1408 TTCTAATGAATTAATATCAAGAGATGAGGGTTGCCACACTGATTTTGCATGTCTTTTACA 1467 Query 58133 CTCTCA 58138 |||||| Sbjct 1468 CTCTCA 1473 >seq166 Length=1757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 ||| ||||||||||| || || || || ||||| || |||||| || |||||| | Sbjct 134 CGATAGGCTAATCGCCTTTGCAGCTGTAGAAGGAATTTTCTTTAGTAGCTCCTTTGCTTC 193 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || |||||| | |||||| | || ||||||| || || || ||| || || || || Sbjct 194 TATTTTTTGGCTAAAGAAAAGAGGATTGATGCCAGGTCTTACATTTTCTAATGAATTAAT 253 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCA 58138 ||| | || |||||| || ||||||||||| || || | ||||||| Sbjct 254 ATCAAGNGATGAGGGTTGNCACACTGATTTTGCATGTCTTTTACACTCTCA 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445719444081840