Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq233 127 2e-24 seq2812 82.4 9e-11 >seq233 Length=4434 Score = 127 bits (140), Expect = 2e-24 Identities = 271/402 (67%), Gaps = 16/402 (4%) Strand=Plus/Plus Query 6840 ATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTG 6899 ||||||||| |||||| | | ||| | ||||||||| |||| | |||| | | Sbjct 1327 ATAAATATGTGCATCTGCAATAAAATGTACAAATTCACCAGGTTGTAGATCAGTAAGATA 1386 Query 6900 AGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCAT 6959 || || | || ||||| | |||||| ||||| ||||||||||| ||||||||| | Sbjct 1387 GGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAAGGTATACCTAATCCAAC 1446 Query 6960 ATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTATAGCATAAAATTGACA 7019 ||| ||||||||||||| | |||| |||| | | || ||| ||| || | Sbjct 1447 ATCACCTGATCTTTGATATAAAGCACAATTCAAAAATCCATTTGTAACATTAAACTGGAA 1506 Query 7020 CAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAG-----ATGGATTCC---AA 7071 |||| ||| |||||||| || |||| |||| | | || |||||||| || Sbjct 1507 TAATAAATGGCATGGAGGCAA---AGCC--ATCTCTTTAAGCTGTATTGGATTCCATGAA 1561 Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGT 7131 || ||||| | | ||||| |||||| | |||| | | |||| |||| Sbjct 1562 ACAACAATTAATCTTCTGCTATC---TGGATTATTCTTTATCTCATTAATAACATTTTGC 1618 Query 7132 AATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAA 7191 || ||||| || || | | ||| | | ||| | |||||||||| ||| || Sbjct 1619 AACTGATCAATTCCTTTATTGGAATAGTCTTCTTCACAGGTCGTATAATTAGCACCATAA 1678 Query 7192 TGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCT 7233 |||| ||||||||| || |||| |||||||||||| || ||| Sbjct 1679 TGTCGCCATTGAAAGCCGTAAACAGGACCTAAATCCCCCTCT 1720 >seq2812 Length=2852 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 6840 ATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTG 6899 ||||||||| |||||| | | ||| | ||||||||| |||| | |||| | | Sbjct 2592 ATAAATATGTGCATCTGCAATAAAATGTACAAATTCACCAGGTTGTAGATCAGTAAGATA 2651 Query 6900 AGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCAT 6959 || || | || ||||| | |||||| ||||| ||||||||| | ||||||||| | Sbjct 2652 GGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAAGGAATACCTAATCCAAC 2711 Query 6960 ATCTGCTGATCTTTGATA 6977 ||| ||||||||||||| Sbjct 2712 ATCACCTGATCTTTGATA 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595809232333200