Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8054 109 4e-19 seq1993 109 4e-19 seq7374 105 4e-18 seq7202 105 4e-18 seq5290 105 4e-18 seq2381 104 2e-17 seq7557 98.7 7e-16 >seq8054 Length=6264 Score = 109 bits (120), Expect = 4e-19 Identities = 82/95 (86%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||| |||| ||||| || ||||| || Sbjct 4410 AAGCCCGTTCCCTTGGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGT 4352 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 4351 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 4317 >seq1993 Length=3966 Score = 109 bits (120), Expect = 4e-19 Identities = 82/95 (86%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||| |||| ||||| || ||||| || Sbjct 648 AAGCCCGTTCCCTTGGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGT 706 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 707 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 741 >seq7374 Length=4409 Score = 105 bits (116), Expect = 4e-18 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||| |||| ||||| || ||||| || Sbjct 2383 AAGCCCGTTCCCTTGGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGT 2325 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||| ||||||| Sbjct 2324 TGATCCATTCATGCGCGTCACTAATTAAATGACGA 2290 >seq7202 Length=5500 Score = 105 bits (116), Expect = 4e-18 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||| |||| ||||| || ||||| || Sbjct 748 AAGCCCGTTCCCTTGGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGT 806 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||| ||||||||||| Sbjct 807 TGATCCATTCATGCGCGTCACTACTTAGATGACGA 841 >seq5290 Length=3242 Score = 105 bits (116), Expect = 4e-18 Identities = 81/95 (85%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| ||||| |||| ||||| || ||||| || Sbjct 3086 AAGCCCGTTCCCTTGGCTGTGGTTTCACTAGA-AGTAAGTAGGGACAGTGGGAATCTAGT 3028 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||| ||||||| Sbjct 3027 TGATCCATTCATGCGCGTCACTAATTAAATGACGA 2993 >seq2381 Length=3349 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||| || | | ||||||||||| || || || ||||| || ||||| ||||| Sbjct 643 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 702 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | |||| || | |||||| || ||||| || || | ||||||||| | || Sbjct 703 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 762 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| |||||| || ||||||| | |||||| ||| || Sbjct 763 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 822 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| ||||| || || || || | || || || || || ||||| Sbjct 823 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 869 >seq7557 Length=3014 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||| || | | |||||||||| || || || ||||| || ||||| ||||| Sbjct 2330 CCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 2389 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | |||| || | |||||| || ||||| || || | ||||||||| | || Sbjct 2390 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 2449 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| |||||| || ||||||| | |||||| ||| || Sbjct 2450 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 2509 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| ||||| || || || || | || || || || || ||||| Sbjct 2510 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 2556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334912799561837