Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2381 100 2e-16 seq7557 95.1 1e-14 >seq2381 Length=3349 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||| | || || || | || || | || || || | || Sbjct 870 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 811 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || ||| | || |||| |||| ||| ||||||||||| || ||||| || Sbjct 810 AGATACCATTGAG--AATGTCAAAGCTAAAATTCAG-GACAAAGAAGGAATACCACCAGA 754 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | |||||||||| || |||||| | ||||| | | | | || || Sbjct 753 TCAACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTA 694 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||| || ||||||||| || || ||||| || ||||| ||||||||||| Sbjct 693 CAACATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGAGGA 642 >seq7557 Length=3014 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||| | || || || | || || | || || || | || Sbjct 2557 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 2498 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || ||| | || |||| |||| ||| ||||||||||| || ||||| || Sbjct 2497 AGATACCATTGAG--AATGTCAAAGCTAAAATTCAG-GACAAAGAAGGAATACCACCAGA 2441 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | |||||||||| || |||||| | ||||| | | | | || || Sbjct 2440 TCAACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTA 2381 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||| || ||||||||| || | ||||| || ||||| ||||||||||| Sbjct 2380 CAACATCCAAAAAGAAAGTACCATTCATTTGGTTCTAAGATTAAGAGGAGGA 2329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433283495454005