Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1856 201 1e-46 >seq1856 Length=1984 Score = 201 bits (222), Expect = 1e-46 Identities = 403/590 (68%), Gaps = 12/590 (2%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| || || || |||| || |||| |||||| || ||||| ||||| | | Sbjct 1458 CATGCAAAATCAGTGTGGCAACCCTCATCTCTTGATATTAATTCATTAGAAAATGTAAGA 1399 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 ||||| | || ||||| |||||| |||||||| || |||||||| | | ||| || Sbjct 1398 CCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAGAAA 1339 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || ||||| || |||||||| || | | | ||| ||| | ||||| ||| | Sbjct 1338 ATTCCTTCTACAGCTGCAAAGGCGATTAGCCTATCGCTAAAG---GGGGAAT--CTGAAG 1284 Query 93272 --ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 || ||||||| ||||| ||||| |||||| | | ||||| |||| | || | Sbjct 1283 CAATGTATTTTAATGCCCATTCGGCCTTTTTCCTGACTATAGGTATTGTTGAAACTGCAT 1224 Query 93330 TAAATAGG-TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 ||||||| || ||| ||| || ||||| | | || || | || ||||||| Sbjct 1223 TAAATAGCCTATTCTT-CTCTTCAGAATCAGAAACCAACACTTCAATAAGCAAAGAATAC 1165 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 || |||||||||| ||||| || |||||||| || || ||| ||||| | Sbjct 1164 ATCTCAGAATGGATTACTTCCATAGCTATTTGGAAGGAATAAAATGCTCTTGCTTCTGGT 1105 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||||| || || | |||||| | | |||||||| | || |||||||| ||||| Sbjct 1104 ATCTGAACCTCACTTGCAAATCTTACAGCCAGATTTTCCATAACAATACCATCAGATGCC 1045 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT-AAGCT--TATCC 93565 |||||||| || | || ||| || ||||||| | | ||||| || || || || | ||| Sbjct 1044 GCAAAAAATGCGAGTACATGTTTAATAAAATTTCTTTCATCTTCATTCAATCTGTTTTCC 985 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || | ||| | | ||| ||||| || |||||||||||| | |||||| Sbjct 984 CATTCAAACTTATCAACAGTTAAATCAACTTCCTCAGTTGTCCAAAACGATCCCTCTGCT 925 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||| ||||| |||||||| | | |||| ||| || || | ||||| Sbjct 924 AATTTATACATTTCCCATATTTTGGGGTATTTAATAGGGAACAAAACAAA 875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556802141675480