Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7557 132 1e-25 seq2381 127 5e-24 seq7574 105 2e-17 >seq7557 Length=3014 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| || || | |||||| || |||||||||||||| || ||||| | || | | ||| Sbjct 2341 TCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCC 2400 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||| | |||||| || || || || || | |||||| ||| ||||||||||| Sbjct 2401 GTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTT 2460 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||||| ||||| ||||| || || || || | ||| | |||||| || | || || Sbjct 2461 GTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACCTCTAAAGTAAT 2520 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475 ||||| || || || |||||||| || || ||||||| Sbjct 2521 TGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 2558 >seq2381 Length=3349 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| || || | ||||| || |||||||||||||| || ||||| | || | | ||| Sbjct 654 TCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCC 713 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||| | |||||| || || || || || | |||||| ||| ||||||||||| Sbjct 714 GTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTT 773 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||||| ||||| ||||| || || || || | ||| | |||||| || | || || Sbjct 774 GTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACCTCTAAAGTAAT 833 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475 ||||| || || || |||||||| || || ||||||| Sbjct 834 TGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 871 >seq7574 Length=465 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| || || | ||||| || |||||||||||||| || ||||| | || | | ||| Sbjct 212 TCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGACTTCTTCC 271 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||| | |||||| | || || | |||||| ||| ||||||||||| Sbjct 272 GTCTTCAAGTTGTTTATTTTTTTTTATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTT 331 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||||| ||||| ||||| || || || || | ||| | |||||| || | || || Sbjct 332 GTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACCTCTAAAGTAAT 391 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475 ||||| || || || |||||||| || || ||||||| Sbjct 392 TGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179527031608506