Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7557 86.0 7e-12 seq2381 86.0 7e-12 >seq7557 Length=3014 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||||||| | | |||||||| | || || || ||||| || ||||| |||| Sbjct 2330 CCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 2389 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || | | |||| || || || |||||||| || || |||| || || || | ||| Sbjct 2390 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 2449 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||||| ||| |||| | ||||| || | | || || | ||| || Sbjct 2450 ATTCCTTCTTTGTCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTAC 2508 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || || || || || || || ||||| ||||||||||||||| Sbjct 2509 CTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 2557 >seq2381 Length=3349 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||||||| | | |||||||| | || || || ||||| || ||||| |||| Sbjct 643 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 702 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || | | |||| || || || |||||||| || || |||| || || || | ||| Sbjct 703 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 762 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||||| ||| |||| | ||||| || | | || || | ||| || Sbjct 763 ATTCCTTCTTTGTCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTAC 821 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || || || || || || || ||||| ||||||||||||||| Sbjct 822 CTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543155579321680