Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2381 120 1e-21 seq1148 120 1e-21 seq7557 114 5e-20 seq1083 111 6e-19 seq7574 98.7 4e-15 seq7914 89.7 2e-12 seq5312 89.7 2e-12 seq5029 89.7 2e-12 seq4249 89.7 2e-12 seq1269 89.7 2e-12 seq7542 84.2 9e-11 seq7255 84.2 9e-11 seq3130 84.2 9e-11 seq1856 84.2 9e-11 >seq2381 Length=3349 Score = 120 bits (132), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107 ||||| | || || || || ||||| || || || || |||||| | || || ||| ||| Sbjct 871 TAATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCAT 812 Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 | |||| |||||| | | ||| |||||||| || || |||||||| || || |||| Sbjct 811 CAGATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATC 752 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA--CTTTGGCGGATTA 391225 ||||| | | ||||| | || |||||||||||||| ||||||| |||| | || || Sbjct 751 AACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTT--CTGACTA 694 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || || | || || || ||||| || || ||||| | |||||| Sbjct 693 CAACATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGA 645 >seq1148 Length=2199 Score = 120 bits (132), Expect = 1e-21 Identities = 276/417 (66%), Gaps = 29/417 (7%) Strand=Plus/Plus Query 502224 GGCGCTTATTCCACTTTTGAAGGGTCTCCATTTTCAGAAGGAAAACTTCAATATCATTTA 502283 || |||||||| |||||||||| || || |||| ||||| || |||||| | || | Sbjct 984 GGAGCTTATTCATCTTTTGAAGGATCACCTATTTCTAAAGGAGAATTTCAATTTGATATG 1043 Query 502284 TGGAATCGTACTCCTATAAATATATCTACTTTAATTGAAGGCAAATCATGGGATTCCTTA 502343 |||||| || |||| ||| |||| | ||||| || | Sbjct 1044 TGGAATGTTAAACCTAGTAATCA------TTTAGAT------------TGGGAGTCTCTT 1085 Query 502344 ATAAATGAAATGAAAAAATATGGAACTAGAAACAGTTTGCTTACAGCACTAATGCCAACA 502403 | |||| |||| | ||| ||||| || || |||| | || || ||||||||| Sbjct 1086 AGAAATAAAATCATTAAACATGGAGTAAGGAATTCTTTGTTAACTGCTTGTATGCCAACA 1145 Query 502404 GCATCTACATCTCAACTATTAGGCAATTATGAATCATTTGAACCATTTACTTCTAATATA 502463 || |||| || ||| || | || | |||||| ||||||||||||||||||| || Sbjct 1146 GCTACTACCTCACAAATACTTGGGTTTAATGAATGCATTGAACCATTTACTTCTAACATT 1205 Query 502464 TATACTAGAAGAACTTTAGCAGGTGAATTTATAGTTGTTAATAAACATTTAATAAATGAT 502523 || || ||| |||| || || || |||| | || |||||||||||||| | || ||| Sbjct 1206 TACACAAGACGAACATTGGCTGGAGAATATCAGGTAATTAATAAACATTTATTGAAGGAT 1265 Query 502524 TTGAATGAAATCGGTGAATGGACTAATGAAATTAGACAAAAAGTAATTAAT----GATAA 502579 || | |||| || |||| || ||||| |||||| | ||| || || | Sbjct 1266 TTAATAGAAAGAGGATTGTGGAACAAAGAAAT----CAAAAATTTATTGATTCAGAATGA 1321 Query 502580 TGGTTCTATTCAAAATATA---TTACTACCTAATATAATTAAAAACATCTATCAAAC 502633 || ||||||||||| ||| || ||||||| ||| | |||| ||| |||| Sbjct 1322 AGGATCTATTCAAAACATACCCATAATACCTAAAGAAATAAGGGACATTTATAAAAC 1378 >seq7557 Length=3014 Score = 114 bits (126), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107 ||||| | || || || || ||||| || || || || |||||| | || || ||| ||| Sbjct 2558 TAATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCAT 2499 Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 | |||| |||||| | | ||| |||||||| || || |||||||| || || |||| Sbjct 2498 CAGATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATC 2439 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA--CTTTGGCGGATTA 391225 ||||| | | ||||| | || |||||||||||||| ||||||| |||| | || || Sbjct 2438 AACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTT--CTGACTA 2381 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || || | || || || |||| || || ||||| | |||||| Sbjct 2380 CAACATCCAAAAAGAAAGTACCATTCATTTGGTTCTAAGATTAAGAGGA 2332 >seq1083 Length=2713 Score = 111 bits (122), Expect = 6e-19 Identities = 290/430 (67%), Gaps = 17/430 (4%) Strand=Plus/Plus Query 364580 TGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAATTTAAGAGGATTAGA 364639 |||||| || || || |||||||||||||| | | ||| | |||| |||| | Sbjct 1104 TGATGGTTTAAAGCCAGGACAAAGAAAAATTTTGTTTTCTGCATTTAAAAGAAAATTAAA 1163 Query 364640 AAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGACCGGGTAGCTTATCA 364699 || || | |||| ||| | |||| || |||| ||| ||||| | |||||||| Sbjct 1164 GAATGA---AATAAAGGTATCAGAATTTGCTGGTTATGTTTCTGAGCAAAGTGCTTATCA 1220 Query 364700 TCACGGTGAGGCAAGTTTAA-TGGGAGCAATAATTGGAATGGCACAAAATTTTGTTGGAA 364758 |||||| || | ||| | || | || ||| |||||||||||||||||||| Sbjct 1221 TCACGGAGACACTTCGTTATGTTCGA-CTATTATTTCTATGGCACAAAATTTTGTTGGTT 1279 Query 364759 GTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCGAGTAATGGGAGGTA 364818 |||||| | || ||| || | ||| |||| |||||||| || || | | || |||| Sbjct 1280 CAAATAATATTAACTTATTACAGCCAGAAGGTCAATTTGGTAGCAGATTGAGTGGTGGTA 1339 Query 364819 AAGATTCTGCCAGC-CCACGTTATATTTGGACCAAACTTGAAAAAGT--GGCAG-GATTA 364874 ||||| | | |||| || | ||| ||| || ||||| | | || ||| Sbjct 1340 AAGATGCAG-CAGCAGCAAG--ATACTTG---CATACTTGTCTTACTCCTTTAGCTTTTA 1393 Query 364875 ATA-TTTAGA-AAAGAAGATAATCCAATTTTAAATTATATTAATGATGATGGATTAATGG 364932 | | ||| || || ||||| | | | ||||||||| | ||||| ||||| || Sbjct 1394 AGATTTTTGATGAAAAAGATGAAGCGTTGTTAAATTATCTGAATGAAGATGGCAAAAACA 1453 Query 364933 TTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGGAGCAACAGGCA 364992 ||||||| || | | | |||| ||| |||||||| ||||||| |||||| | ||| | Sbjct 1454 TTGAACCAGATTACTTTATTCCAATTGTTCCTATGGTTTTAGTCAATGGAACTGAAGGTA 1513 Query 364993 TTGGTACTGG 365002 |||| || || Sbjct 1514 TTGGAACAGG 1523 >seq7574 Length=465 Score = 98.7 bits (108), Expect = 4e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107 ||||| | || || || || ||||| || || || || |||||| | || || ||| ||| Sbjct 429 TAATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCAT 370 Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 | |||| |||||| | | ||| |||||||| || || |||||||| || || |||| Sbjct 369 CAGATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATC 310 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 ||||| | | || | |||||||||||||| ||||||| | | | || || | Sbjct 309 AACAAAGACTTATAAAAAAAAATAAACAACTTGAAGACGGAAGAAGTCTTTCTGACTACA 250 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 | || | || || || ||||| || || ||||| | |||||| Sbjct 249 ACATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGA 203 >seq7914 Length=3948 Score = 89.7 bits (98), Expect = 2e-12 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 420713 TATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGA 420772 ||||||||||||||||||| |||| || ||| |||| | | || ||| ||||| | Sbjct 3400 TATCAATTCCTCTTCTTCCGGCTCTACCACTCATCTGAATATACTCCCCAGG-CGTAACA 3458 Query 420773 A-TCTTCTACCACAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGC 420831 | || | | | ||||| |||| | | || || | ||| ||||| ||| Sbjct 3459 AGTCGTAGTTCTTTACCATCAAATTTCTTGACTGATGTGAAAATTACACATTTTGCTGGC 3518 Query 420832 ATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAttttt-ttGA 420890 ||||| | |||| ||||| ||||| || || ||||| | ||||| || || |||| Sbjct 3519 ATATTCAATCCAATTGAAAATGTTTCTGTAGCAAACAATATTTTAAGCAAACCTTCTTGA 3578 Query 420891 ATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 | |||| | ||| || |||||||||||||| || | | ||| ||||||||| Sbjct 3579 A-AAAGTAATTCTACTATTTCTTTTAAAATTGGGAGCAAACCGGAATGATGA 3629 >seq5312 Length=4908 Score = 89.7 bits (98), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 420713 TATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGA 420772 ||||||||||||||||||| |||| || ||| |||| | | || || ||||| | Sbjct 4542 TATCAATTCCTCTTCTTCCGGCTCTACCACTCATCTGAATATACTCCCCANGNCGTAACA 4601 Query 420773 A-TCTTCTACCACAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGC 420831 | || | | | ||||| |||| | | || || | ||| ||||| ||| Sbjct 4602 AGTCGTAGTTCTTTACCATCAAATTTCTTGACTGATGTGAAAATTACACATTTTGCTGGC 4661 Query 420832 ATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAttttt-ttGA 420890 ||||| | |||| ||||| ||||| || || ||||| | ||||| || || |||| Sbjct 4662 ATATTCAATCCAATTGAAAATGTTTCTGTAGCAAACAATATTTTAAGCAAACCTTCTTGA 4721 Query 420891 ATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 | |||| | ||| || |||||||||||||| || | | ||| ||||||||| Sbjct 4722 A-AAAGTAATTCTACTATTTCTTTTAAAATTGGGAGCAAACCGGAATGATGA 4772 >seq5029 Length=2427 Score = 89.7 bits (98), Expect = 2e-12 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 420713 TATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGA 420772 ||||||||||||||||||| |||| || ||| |||| | | || ||| ||||| | Sbjct 284 TATCAATTCCTCTTCTTCCGGCTCTACCACTCATCTGAATATACTCCCCAGG-CGTAACA 342 Query 420773 A-TCTTCTACCACAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGC 420831 | || | | | ||||| |||| | | || || | ||| ||||| ||| Sbjct 343 AGTCGTAGTTCTTTACCATCAAATTTCTTGACTGATGTGAAAATTACACATTTTGCTGGC 402 Query 420832 ATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAttttt-ttGA 420890 ||||| | |||| ||||| ||||| || || ||||| | ||||| || || |||| Sbjct 403 ATATTCAATCCAATTGAAAATGTTTCTGTAGCAAACAATATTTTAAGCAAACCTTCTTGA 462 Query 420891 ATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 | |||| | ||| || |||||||||||||| || | | ||| ||||||||| Sbjct 463 A-AAAGTAATTCTACTATTTCTTTTAAAATTGGGAGCAAACCGGAATGATGA 513 >seq4249 Length=2775 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||||||||||| || || ||||| ||||| ||| ||||||| |||||| |||| Sbjct 701 GTAATTACTGTACCGGCATATTTTGATGATCATCAAAGGCAAGCTACTAAAACAGCAGCT 760 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | | |||||||||||||| || |||| | |||||||| || || |||||| | || Sbjct 761 AAATTAGCTGGTTTAAATGTAATTAGAATACTCAATGAACCAACTGCTGCTGCTTTGGCT 820 Query 451445 TATGGACTA 451453 |||||| || Sbjct 821 TATGGATTA 829 >seq1269 Length=1176 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||||||||||| || || ||||| ||||| ||| ||||||| |||||| |||| Sbjct 814 GTAATTACTGTACCGGCATATTTTGATGATCATCAAAGGCAAGCTACTAAAACAGCAGCT 755 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | | |||||||||||||| || |||| | |||||||| || || |||||| | || Sbjct 754 AAATTAGCTGGTTTAAATGTAATTAGAATACTCAATGAACCAACTGCTGCTGCTTTGGCT 695 Query 451445 TATGGACTA 451453 |||||| || Sbjct 694 TATGGATTA 686 >seq7542 Length=3629 Score = 84.2 bits (92), Expect = 9e-11 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 420713 TATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGA 420772 |||||||||||||||| || |||| || ||| |||| | | || ||| ||||| | Sbjct 3555 TATCAATTCCTCTTCTGCCGGCTCTACCACTCATCTGAATATACTCCCCAGG-CGTAACA 3497 Query 420773 A-TCTTCTACCACAATCATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGC 420831 | || | | | ||||| |||| | | || || | ||| ||||| ||| Sbjct 3496 AGTCGTAGTTCTTTACCATCAAATTTCTTGACTGATGTGAAAATTACACATTTTGCTGGC 3437 Query 420832 ATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAttttt-ttGA 420890 ||||| | |||| ||||| ||||| || || ||||| | ||||| || || |||| Sbjct 3436 ATATTCAATCCAATTGAAAATGTTTCTGTAGCAAACAATATTTTAAGCAAACCTTCTTGA 3377 Query 420891 ATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 | |||| | ||| || |||||||||||||| || | | ||| ||||||||| Sbjct 3376 A-AAAGTAATTCTACTATTTCTTTTAAAATTGGGAGCAAACCGGAATGATGA 3326 >seq7255 Length=3735 Score = 84.2 bits (92), Expect = 9e-11 Identities = 161/238 (68%), Gaps = 11/238 (5%) Strand=Plus/Minus Query 407859 CAAAAAATTGATCTTCGAATTAGaaaaaaaaCCATTAAATTAGAATATGGAAATATAGTT 407918 |||| ||||||| | || ||| | || |||| |||||| | ||| |||| || Sbjct 2444 CAAAGAATTGATTTAAGATTTAACAGAAGTGACATTGCATTAGAGGAGGGATATATTGTA 2385 Query 407919 CATAGACACTTACAGGATGGAGACCCAATTTTATTCAATCGTCAACCTTCTTTACATAAA 407978 | |||||| | ||||||||| ||||||| || | ||||| |||||||||| Sbjct 2384 GAAAGACACATGTTGGATGGAGATTATGTTTTATTTAACAGACAACCAAGTTTACATAAA 2325 Query 407979 CCTTCTATGATGGGTCATAAGGTACAAGTAGCAAAAACAGATGGTATTAAT-ACTTTTAG 408037 |||||||||| || | || ||||| |||| | ||| || ||||| Sbjct 2324 ATGTCTATGATGGCACACAGAGTTAAAGTA----------ATGGAAGGAATCACATTTAG 2275 Query 408038 AATGAATGTATCTAGTACTGCTCCCTATGGTGCTGATTTTGATGGGGATGAAATGAAT 408095 | | ||| | ||| ||| | ||||| ||| ||||||||||| |||||||||||| Sbjct 2274 ACTTAATCTTTCTGCCACTTCACCCTACAATGCAGATTTTGATGGTGATGAAATGAAT 2217 >seq3130 Length=2572 Score = 84.2 bits (92), Expect = 9e-11 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 509512 TTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGAGTCCCA 509571 |||||||||| || ||||||| |||||||||||||||| |||||||||||| ||||||| Sbjct 2060 TTAGCTCAGTCGG--TAGAGCATCAGGCTTTTAACCTGAGGGTCGTGGGTTCAAGTCCCA 2117 Query 509572 CAT 509574 ||| Sbjct 2118 CAT 2120 >seq1856 Length=1984 Score = 84.2 bits (92), Expect = 9e-11 Identities = 185/275 (67%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 496953 TTTCCTATTAAATATCATAAAATCTGGGATTTATATaaaaaaaTGGAAGCAGCTTTTTGG 497012 || ||||||||||| | ||||| ||||| | |||||| | || | | | |||||| Sbjct 884 TTCCCTATTAAATACCCCAAAATATGGGAAATGTATAAATTAGCAGAGGGATCGTTTTGG 943 Query 497013 ACAGCTGAAGAAATAGATTGGTCTAAAGATAAACATGATTTTAAAAA---ATTAAATCAA 497069 ||| |||| ||| | |||| || ||||| ||| | |||| ||| ||| || Sbjct 944 ACAACTGAGGAAGTTGATTTAACTGTTGATAAGTTTGAATGGGAAAACAGATTGAATGAA 1003 Query 497070 GATGAACAACGATTTATTAAATATGTATTAGCAtttttttCGGCAAGTGATACAATTGTA 497129 |||||| | ||||||||| ||||| | ||||||||| ||||| |||| ||||| Sbjct 1004 GATGAAAGAAATTTTATTAAACATGTACTCGCATTTTTTGCGGCATCTGATGGTATTGTT 1063 Query 497130 AATATTAATTTAGGAGAAAGATTATCTCATGAAGTTCAACCACTTGAAGCCAAA--ATTG 497187 | ||| | | | |||||| | ||| ||||| || ||||| | | ||| Sbjct 1064 ATGGAAAATCTGGCTGTAAGATTTGCAAGTGAGGTTCAGATACCAGAAGCAAGAGCATT- 1122 Query 497188 CTTATACTTTTCAAATGATGATGGAAGGGATCCAT 497222 |||| | || ||||| ||||||| |||||| Sbjct 1123 -TTATTCCTTCCAAATAGCTATGGAAGTAATCCAT 1156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975505079832116