Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1083 147 2e-29 seq1148 138 9e-27 seq678 134 1e-25 seq4249 114 1e-19 seq1269 114 1e-19 seq166 104 2e-16 seq1856 102 6e-16 seq8103 98.7 8e-15 seq7255 98.7 8e-15 seq5609 91.5 1e-12 seq2711 91.5 1e-12 >seq1083 Length=2713 Score = 147 bits (162), Expect = 2e-29 Identities = 212/300 (71%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 635437 TAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCT 635496 ||||||||| |||||||| || || |||||||| || || ||||| ||| | ||||| || Sbjct 351 TAAATGTACTCTAATTTTAACCGAAGGAGATTCTGCCAAGACATTAGCTGTTTCTGGACT 410 Query 635497 TAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGT 635556 | || | |||||||||| ||||||||| || ||| | | ||||||| | || ||||| Sbjct 411 GAGTGNAGTAGGAAGAGATTTTTATGGAGTGTTTCCATTAAAAGGAAAANTGTTAAATGT 470 Query 635557 TAGGGATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaT 635616 || || || | | ||| | ||| ||| || | ||||| | ||| | || |||| Sbjct 471 AAGAGAGGCAAATGTTAAGCAGATTAGTGAAAACAAAGAAATAAGTGCACTAAAGCAAAT 530 Query 635617 TGTTGGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTAT 635676 | || | |||| || | |||||| || | |||| ||| ||||||| | | Sbjct 531 ATTAGGGTTAAAACACGGGACTGTTTATAATACAACCCAAGGCTTAAGATATGGACATGT 590 Query 635677 TATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTT 635736 | || | |||| || ||| |||||| | |||||||||||||||||||| ||||| Sbjct 591 CTTAATCATGACTGACCAGGATCATGATGGATCACATATCAAAGGATTAATCATAAATTT 650 >seq1148 Length=2199 Score = 138 bits (152), Expect = 9e-27 Identities = 292/432 (68%), Gaps = 9/432 (2%) Strand=Plus/Plus Query 399948 CCTATTGGTATTGGAGTTCAGGGATTAGCTGATGTATTTGCTATGTTTAAGACTCCTTTT 400007 || |||||||||||||| || || ||||||||| ||||||| ||| |||| | | ||| Sbjct 831 CCCATTGGTATTGGAGTACAAGGCTTAGCTGATTTATTTGCCATGCTTAAAATATCATTT 890 Query 400008 GATTCGGAAATTGCTCGTGATCTCAATCGTAAAATTTTCGAAACAATTTATTATGGAGCT 400067 ||||| || ||| | ||| | || || || ||| ||||| |||| ||| Sbjct 891 GATTCCGAGGAAGCTAAAATATTAAATAGAAATATCTTTGAATGTATTTACTATGCAGCA 950 Query 400068 TTAACAGAATCCAATAAACTTGCTAGAGAATTTGGTACATATCAAACTTATCAAGGAAGT 400127 ||| ||| || | | |||| |||| || | ||| | ||| | ||||| Sbjct 951 TTAGAAGAGAGTAACCTATTGGCTATAGAAGAAGGAGCTTATTCATCTTTTGAAGGATCA 1010 Query 400128 CCTATTTCTCAAGGAAAATTCCAATTTGATCTTTGGAATTTCGATAAATCACAATTGAGC 400187 ||||||||| ||||| |||| ||||||||| | |||||| | |||| | | | | | Sbjct 1011 CCTATTTCTAAAGGAGAATTTCAATTTGATATGTGGAAT---GTTAAA--CCTAGTAATC 1065 Query 400188 GGAATGTGGGATTGGGAACTTTTGCGTCAAGAAATTTTAAATCATGGTGTTCGTAATAGT 400247 || | |||||||| | | | | |||| | || ||||| || | ||| | Sbjct 1066 ---AT-TTAGATTGGGAGTCTCTTAGAAATAAAATCATTAAACATGGAGTAAGGAATTCT 1121 Query 400248 CTAGTTACAACCTGTATGCCAACTGCAAGTACTTCTCAAATTATGGGATGGAATGAATGT 400307 | | || | ||||||||||| || | ||| || ||||| | || | |||||||| Sbjct 1122 TTGTTAACTGCTTGTATGCCAACAGCTACTACCTCACAAATACTTGGGTTTAATGAATGC 1181 Query 400308 ATTGAACCTTATACAGAAAATATTTATTCAAGAAGTACTATGGCTGGAGAATATTTTGTG 400367 |||||||| | ||| || ||||| ||||| | || |||||||||||||| || Sbjct 1182 ATTGAACCATTTACTTCTAACATTTACACAAGACGAACATTGGCTGGAGAATATCAGGTA 1241 Query 400368 ATTAATAAACAT 400379 |||||||||||| Sbjct 1242 ATTAATAAACAT 1253 >seq678 Length=924 Score = 134 bits (148), Expect = 1e-25 Identities = 207/294 (70%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 635437 TAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCT 635496 ||||||||| |||||||| || || |||||||| || || ||||| ||| | ||||| || Sbjct 294 TAAATGTACTCTAATTTTAACCGAAGGAGATTCTGCCAAGACATTAGCTGTTTCTGGACT 235 Query 635497 TAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGT 635556 | ||| | |||||||||| ||||||||| || ||| | | ||||||| | || ||||| Sbjct 234 GAGTGTAGTAGGAAGAGATTTTTATGGAGTGTTTCCATTAAAAGGAAAAATGTTAAATGT 175 Query 635557 TAGGGATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaT 635616 || || || | | ||| | ||| ||| || | ||||| | ||| | || |||| Sbjct 174 AAGAGAAGCAAATGTTAAGCAGATTAGTGAAAACAAAGAAATAAGTGCACTAAAGCAAAT 115 Query 635617 TGTTGGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTAT 635676 | || | |||| || | |||||| || | |||| ||| ||||||| | | Sbjct 114 ATTAGGGTTAAAACACGGGACTGTTTATAATACAACCCAAGGCTTAAGATATGGACATGT 55 Query 635677 TATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGAT-TAATCA 635729 | || | |||| || ||| |||||| | ||||||||||||| |||||| Sbjct 54 CTTAATCATGACTGACCAGGATCATGATGGATCACATATCAAAGGATATAATCA 1 >seq4249 Length=2775 Score = 114 bits (126), Expect = 1e-19 Identities = 192/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||||| ||||| |||||||| ||||| || || | | ||||| |||| || Sbjct 967 ATCAATGTCTTCGCCTCCCAAAAATGTATTCCCATTTGTGGATAGCACTTGAAAAATGCC 908 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || || | |||| || || |||| ||| |||||||| | |||| ||| | || Sbjct 907 ATTTTTTATTTTTAAAATAGATATATCAAAGGTACCACCACCTAAATCATAAACAGCCAC 848 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 ||| ||| |||| |||| ||| |||| || |||||||||||||||||||| Sbjct 847 T---ATTCCTTCTTCTTTGTTTA-ATC-----CATAAGCCAAAGCAGCAGCAGTTGGTTC 797 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| | ||||| | ||||| | |||||| | | | |||| |||||| ||||| || Sbjct 796 ATTGAGTATTCTAATTACATTTAAACCAGCTAATTTAGCTGCTGTTTTAGTAGCTTGCCT 737 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAAC 518301 ||| ||| | ||||||||| || |||||||| || Sbjct 736 TTGATGATCATCAAAATATGCCGGTACAGTAATTAC 701 >seq1269 Length=1176 Score = 114 bits (126), Expect = 1e-19 Identities = 192/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||||| ||||| |||||||| ||||| || || | | ||||| |||| || Sbjct 548 ATCAATGTCTTCGCCTCCCAAAAATGTATTCCCATTTGTGGATAGCACTTGAAAAATGCC 607 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || || | |||| || || |||| ||| |||||||| | |||| ||| | || Sbjct 608 ATTTTTTATTTTTAAAATAGATATATCAAAGGTACCACCACCTAAATCATAAACAGCCAC 667 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 ||| ||| |||| |||| ||| |||| || |||||||||||||||||||| Sbjct 668 T---ATTCCTTCTTCTTTGTTTA-ATC-----CATAAGCCAAAGCAGCAGCAGTTGGTTC 718 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||| | ||||| | ||||| | |||||| | | | |||| |||||| ||||| || Sbjct 719 ATTGAGTATTCTAATTACATTTAAACCAGCTAATTTAGCTGCTGTTTTAGTAGCTTGCCT 778 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAAC 518301 ||| ||| | ||||||||| || |||||||| || Sbjct 779 TTGATGATCATCAAAATATGCCGGTACAGTAATTAC 814 >seq166 Length=1757 Score = 104 bits (114), Expect = 2e-16 Identities = 257/382 (67%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 396937 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 396995 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 527 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 469 Query 396996 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 397055 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 468 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 409 Query 397056 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCG 397114 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| ||| Sbjct 408 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAACTGCTGAA 350 Query 397115 TCAATAATTTGGTAAACAACAGATTCTTTCAAACGA-TTATT---CAACAATGAATACAT 397170 ||| |||| ||| | | ||| | | | || ||||| ||| || | | Sbjct 349 GTAATGATTTCGTAGATA--CGAT--TAGCCGATGATTTATTTTGCAAATGAGAGTGTAA 294 Query 397171 AATACAAGCAAGTTCTACATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAAT 397230 || ||| |||| || || ||||| | | || |||| ||| || | | Sbjct 293 AAGACATGCAAAATCAGTGTGNCAACCCTCATCNCTTGATATTAATTCATTAGAAAATGT 234 Query 397231 TAGACCAGGCATTACATGCATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCC 397290 ||||| ||||| || | |||| | |||| ||| ||||| |||||||| || | Sbjct 233 AAGACCTGGCAT------CAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCT 180 Query 397291 ACTAAAGAAAACGCCTTCTACA 397312 ||||||||||| ||||||||| Sbjct 179 ACTAAAGAAAATTCCTTCTACA 158 >seq1856 Length=1984 Score = 102 bits (112), Expect = 6e-16 Identities = 257/382 (67%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 396937 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 396995 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 1696 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 1638 Query 396996 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 397055 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 1637 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 1578 Query 397056 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCG 397114 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| ||| Sbjct 1577 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAACTGCTGAA 1519 Query 397115 TCAATAATTTGGTAAACAACAGATTCTTTCAAACGA-TTATT---CAACAATGAATACAT 397170 ||| |||| ||| | | ||| | | | || ||||| ||| || | | Sbjct 1518 GTAATGATTTCGTAGATA--CGAT--TAGCCGATGATTTATTTTGCAAATGAGAGTGTAA 1463 Query 397171 AATACAAGCAAGTTCTACATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAAT 397230 || ||| |||| || || ||||| | | || |||| ||| || | | Sbjct 1462 AAGACATGCAAAATCAGTGTGGCAACCCTCATCTCTTGATATTAATTCATTAGAAAATGT 1403 Query 397231 TAGACCAGGCATTACATGCATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCC 397290 ||||| ||||| || | |||| | |||| ||| ||||| |||||||| || | Sbjct 1402 AAGACCTGGCAT------CAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCT 1349 Query 397291 ACTAAAGAAAACGCCTTCTACA 397312 ||||||||||| ||||||||| Sbjct 1348 ACTAAAGAAAATTCCTTCTACA 1327 Score = 100 bits (110), Expect = 2e-15 Identities = 136/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 397575 TAACAATACCATCAGCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCAT 397634 ||||||||||||||| ||||||||||||||| | ||| || ||||||||||||| |||| Sbjct 1064 TAACAATACCATCAGATGCCGCAAAAAATGCGAGTACATGTTTAATAAAATTTCTTTCAT 1005 Query 397635 CATCGCTCAAATGATTATTCCAATCATTCACATCTTTTGCCAAATCCACTTCTTCAACTG 397694 | || |||| || | ||| ||| | ||| | ||||| ||||| ||| || Sbjct 1004 CTTCATTCAATCTGTTTTCCCATTCAAACTTATCAACAGTTAAATCAACTTCCTCAGTTG 945 Query 397695 TCCAATAATTTTTCATCTGAT-CCTTGTAATTATCCCATACTTTTTGGTATTTAATAGGA 397753 ||||| || | | |||| | || || | ||||||| ||| ||||||||||||| Sbjct 944 TCCAA-AACGATCCCTCTGCTAATTTATACATTTCCCATATTTTGGGGTATTTAATAGG- 887 Query 397754 TGAACA 397759 ||||| Sbjct 886 -GAACA 882 >seq8103 Length=650 Score = 98.7 bits (108), Expect = 8e-15 Identities = 128/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 396937 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 396995 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 408 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 350 Query 396996 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 397055 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 349 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 290 Query 397056 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAA 397106 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| Sbjct 289 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAA 239 >seq7255 Length=3735 Score = 98.7 bits (108), Expect = 8e-15 Identities = 163/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 668848 ATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTC 668907 |||||| || || ||||| | | |||||||| || ||||| ||| | || ||| | || Sbjct 2690 ATTAAG-GGAAAGGAAGGAAGGGTGAGAGGAAACTTAATGGGTAAAAGAGTTGATTTTTC 2632 Query 668908 TGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCT 668967 |||| | |||| ||||| | ||| | ||||||| | || ||| ||||||||||| | Sbjct 2631 TGCAAGATCAGTAATTACCCCAGATTCTAATATTGACTTAAACGAACTTGGTGTTCCTAT 2572 Query 668968 TATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || || || | | || ||| || | |||||| ||||||| | || Sbjct 2571 TAAGATAGCAATGGTACACACCTTTCCTGAGAGAGTAACATCTTTTAATATTAGCAAATT 2512 Query 669028 GACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCGGGTGCCAATTTTGTAAT 669081 |||| ||||||| |||||||| || | | |||||||| || |||| |||||| Sbjct 2511 GACTAAATTAGTAAAAAATGGACCAACAATTTATCCGGGAGCTAATTATGTAAT 2458 >seq5609 Length=2322 Score = 91.5 bits (100), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || || || || |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 966 GCTACTATTGCTTTTGGTATGGGTATTAATAAGAAGGATGTTAGGTTTGTTATTCATTAC 907 Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119 ||| |||| | | || ||||||| ||||| | ||||||||||| | |||||| Sbjct 906 TCCATTCCTAAGAGTTTAGATTGTTATTACCAAGAGACAGGTAGAGCAGGAAGAGATGGA 847 >seq2711 Length=2586 Score = 91.5 bits (100), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || || || || |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 451 GCTACTATTGCCTTTGGTATGGGTATTAATAAGAAGGATGTTAGGTTTGTTATTCATTAC 392 Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119 ||| |||| | | || ||||||| ||||| | ||||||||||| | |||||| Sbjct 391 TCCATTCCTAAGAGTTTAGATTGTTATTACCAAGAGACAGGTAGAGCAGGAAGAGATGGA 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780404224501462