Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2381 138 9e-27 seq7557 134 1e-25 seq5717 113 4e-19 seq7574 107 2e-17 seq1083 107 2e-17 seq624 104 2e-16 seq7255 96.9 3e-14 seq2511 89.7 4e-12 seq4348 87.8 1e-11 seq678 87.8 1e-11 >seq2381 Length=3349 Score = 138 bits (152), Expect = 9e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | |||||||||||||||||| || ||||| |||| || ||||| ||| Sbjct 658 AGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCCGTCT 717 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||||||||| || ||||||||||||||||| ||||| || || ||||||||||| || Sbjct 718 TCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTTGTCC 777 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441 |||||||| ||| || |||||| ||||| | || ||| || | ||||| || Sbjct 778 TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTAC-CTCTAAAGTAATTGT 836 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || || || |||||||| Sbjct 837 CTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 869 >seq7557 Length=3014 Score = 134 bits (148), Expect = 1e-25 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | ||||| |||||||||||| || ||||| |||| || ||||| ||| Sbjct 2345 AGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCCGTCT 2404 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||||||||| || ||||||||||||||||| ||||| || || ||||||||||| || Sbjct 2405 TCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTTGTCC 2464 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441 |||||||| ||| || |||||| ||||| | || ||| || | ||||| || Sbjct 2465 TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTAC-CTCTAAAGTAATTGT 2523 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || || || |||||||| Sbjct 2524 CTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 2556 >seq5717 Length=1870 Score = 113 bits (124), Expect = 4e-19 Identities = 284/421 (67%), Gaps = 12/421 (3%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 ||||||| | ||||| || || | | |||||| |||||||| || |||||||||| Sbjct 357 TTTTATCCTCAACCATATGCTTTAATCTTTGATAGTATGTTGGGCCTATGAATATTTGTG 416 Query 344315 CTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGT- 344373 ||| || || | || || | ||| |||||| ||| ||| | |||| || Sbjct 417 CTTGCAACTTTCGACCTGTAAAACCACAATACATAACTTCTAATCCTCT--CTTCTGGTA 474 Query 344374 -CCTAAAGCTACTAAATCATCATTAATT--TTATTAATATTAACTCCTGTAAATGGAGTT 344430 ||||||| ||| ||| | | | | || || | ||| | |||| || | || Sbjct 475 TCCTAAAGA-ACTTAATTTTTCTGAGATACTTTCTACTGTTA-CACCTGAGAAAGAGGTA 532 Query 344431 GCATCTCCAT-ATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTG 344489 |||||||| | || || ||||| ||||| |||||||||| ||| |||||| | || Sbjct 533 GCATCTCCTTCATCTCCACTTAAT-GCACATACTTTACCTAATAATGCTTCAATAAGATG 591 Query 344490 ACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCC 344549 |||||| ||||| | | || ||| || |||||||||||||||||||| || ||||| Sbjct 592 ACCTATAGTCATTCTGCTAGGTATAGCATGTGGATTAATAATAATATCAGGTATCAATCC 651 Query 344550 TGATTTTGTGAATGGAAGATCTGCACGATGAATTTTAAATCCAACTGTTCCTTTTTGTCC 344609 || || ||||| | ||| | | ||| | | || | ||||||||||| || Sbjct 652 ATCCTTAGTAAATGGTAAATCCTCTTGTCTCATTGTTATGCCTATAGTTCCTTTTTGACC 711 Query 344610 AGCTCTTGATGAGAATTTATCA-CCTACTGCTGGAATTCTTTCTGATCTAACTCGAATCT 344668 | ||| | ||||||||| || ||| ||| ||||| | |||||||| || || Sbjct 712 ATGTCTACTAGCAAATTTATCACCCGTCTG-TGGTATTCTGTTACTTCTAACTCTAACCT 770 Query 344669 T 344669 | Sbjct 771 T 771 >seq7574 Length=465 Score = 107 bits (118), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | |||||||||||||||||| || ||||| |||| ||| ||||| ||| Sbjct 216 AGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGACTTCTTCCGTCT 275 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||||||||| ||||||||||| ||||| || || ||||||||||| || Sbjct 276 TCAAGTTGTTTATTTTTTTTTATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTTGTCC 335 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441 |||||||| ||| || |||||| ||||| | || ||| || | ||||| || Sbjct 336 TGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTAC-CTCTAAAGTAATTGT 394 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || || || |||||||| Sbjct 395 CTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 427 >seq1083 Length=2713 Score = 107 bits (118), Expect = 2e-17 Identities = 327/500 (65%), Gaps = 13/500 (3%) Strand=Plus/Minus Query 428102 CCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAATAT 428161 || |||||||| ||||| || ||||| || | || ||| |||| | ||| | | || Sbjct 1523 CCTGTTCCAATACCTTCAGTTCCATTGACTAAAACCATAGGAACAATTGGAATAAAGTAA 1464 Query 428162 TGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATCATGCTCG 428221 | ||||||||| |||| |||||||| | ||| ||| | | ||| | || Sbjct 1463 TCTGGTTCAATGTTTTTGCCATCTTCATTCAGATAATTTAACAACGCTTCATCTTTTTCA 1404 Query 428222 ATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCGCTTGCGGAA 428281 ||| || || ||| || | ||| ||| | |||||||| ||| | | Sbjct 1403 TCAAAAATCTTAAAAGCTAAAGGAGTAAGACAAGTATGCAAGTATCTTGCTGCTGCTGCA 1344 Query 428282 TCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAATATTA 428341 |||||||| || || ||| | |||||||| || | ||| ||||| ||||||||| Sbjct 1343 TCTTTACCACCACTCAATCTGCTACCAAATTGACCTTCTGGCTGTAATAAGTTAATATTA 1284 Query 428342 TTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTTCACCA 428401 || || ||| ||||||| |||||| || ||| || | ||| || || || Sbjct 1283 TTTGAACCAACAAAATTTTGTGCCATAGAAATAATAGTCGAACATAACGAAGTGTCTCCG 1224 Query 428402 TGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTTC-TTC 428460 |||||||| | || | ||||| ||| |||||||||||||||||||| ||| Sbjct 1223 TGATGATAAGCACTTTGCTCAGAAACATAACCAGCAAATTCTGATACCTTTATTTCATTC 1164 Query 428461 TTTATAAATACCTTCTTCTACTGATCCATAA---AATACTTTGCGTTGTGATGGTTTGAA 428517 |||| | ||||| || || || || || | ||| | |||| ||| || || Sbjct 1163 TTTA-----ATTTTCTTTTA--AATGCAGAAAACAAAATTTTTCTTTGTCCTGGCTTTAA 1111 Query 428518 TCCATC-CATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAATGATATTAGTT 428576 ||||| || || |||||| || || | ||| ||| ||| ||||||| | || | || Sbjct 1110 ACCATCACAGAA-ATTAGGGATGCTTCGGATATTGTCAGCCATTGAGAATAAAATAAATT 1052 Query 428577 CTTGATGAATGAAATCATAA 428596 | | | || |||||| || Sbjct 1051 CCTTGTTAACAAAATCAGAA 1032 Score = 86.0 bits (94), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 429292 TACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACATT 429351 |||||| || |||||| || | |||||| || |||||| |||||| || | || | Sbjct 471 TACATTTAACANTTTTCCTTTTAATGGAAACACTCCATAAAAATCTCTTCCTACTNCACT 412 Query 429352 TAGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACATTT 429411 |||||||| | || || || || || ||||||||||| || ||||| || |||||||| Sbjct 411 CAGTCCAGAAACAGCTAATGTCTTGGCAGAATCTCCTTCGGTTAAAATTAGAGTACATTT 352 Query 429412 A 429412 | Sbjct 351 A 351 >seq624 Length=5948 Score = 104 bits (114), Expect = 2e-16 Identities = 213/312 (68%), Gaps = 10/312 (3%) Strand=Plus/Plus Query 390858 TCTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTG 390917 |||||| | |||||||| | ||| | || |||| |||| |||| | | ||||| Sbjct 5511 TCTTACAGACCCATCATAATTTACCCTTGCATCCTCTAGGCTTTTCACTATTCTCCTTTG 5570 Query 390918 GATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCAT 390977 || || ||||| |||||||||||| || || | ||| | ||||||||| ||| | || Sbjct 5571 AATGTACCCAGTTTCTGCAGTTTTACAGGCCGTGTCAATCAAACCTTCTCTCCCTCCAAT 5630 Query 390978 AACTTGGAAGAAAAATTCCATAGGATTGAGTCC--AGAAATAAATGATCCAAAACAAAAT 391035 | | || ||||||||||| || | ||| | ||| ||||||| | || ||| |||| Sbjct 5631 AGCATGAAAGAAAAATTCAATTGCATTTAATCCTGTGAAATAACT-ATTTGTAAC-AAAT 5688 Query 391036 CCT---CTTGCAGAAGGACTATCATCATGTTGTGCAAACATAGGTAATGTTCTATTATTA 391092 ||| ||| | | | || ||||| | |||| |||||||| ||| |||||| Sbjct 5689 CCTTTACTTTCTGCTG---AATAATCATCCTTAACAAAATGAGGTAATGCTCTTTTATTA 5745 Query 391093 AATCTTTTTTGAATTCGTTTATCTTCGACAATAACTTGTCCAATACATCCTGCAATCTGT 391152 |||| |||||||||| |||| | | | ||| || | |||| | | || |||| Sbjct 5746 AATCCAAAAGGAATTCGTTTTCCTTCTAAATTTTGTTGCCCTACACATGCAGTAACCTGT 5805 Query 391153 GCAGCATTCATA 391164 | | ||| ||| Sbjct 5806 GAAATATTGATA 5817 >seq7255 Length=3735 Score = 96.9 bits (106), Expect = 3e-14 Identities = 187/271 (69%), Gaps = 10/271 (4%) Strand=Plus/Plus Query 390899 TTTTAACTAATTTTCTTTGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAA 390958 |||| |||| | | ||||| || || ||||| |||||||||||| || || | ||| | Sbjct 1178 TTTTCACTATTCTCCTTTGAATGTACCCAGTTTCTGCAGTTTTACAGGCCGTGTCAATCA 1237 Query 390959 TACCTTCTCTTCCTGCCATAACTTGGAAGAAAAATTCCATAGGATTGAGTCC--AGAAAT 391016 ||||||||| ||| | ||| | || ||||||||||| || | ||| | ||| ||||| Sbjct 1238 AACCTTCTCTCCCTCCAATAGCATGAAAGAAAAATTCAATTGCATTTAATCCTGTGAAAT 1297 Query 391017 AAATGATCCAAAACAAAATCCT---CTTGCAGAAGGACTATCATCATGTTGTGCAAACAT 391073 || | || ||| ||||||| ||| | | | || ||||| | |||| Sbjct 1298 AACT-ATTTGTAAC-AAATCCTTTACTTTCTGCTG---AATAATCATCCTTAACAAAATG 1352 Query 391074 AGGTAATGTTCTATTATTAAATCTTTTTTGAATTCGTTTATCTTCGACAATAACTTGTCC 391133 |||||||| ||| |||||||||| |||||||||| |||| | | | ||| || Sbjct 1353 AGGTAATGCTCTTTTATTAAATCCAAAAGGAATTCGTTTTCCTTCTAAATTTTGTTGCCC 1412 Query 391134 AATACATCCTGCAATCTGTGCAGCATTCATA 391164 | |||| | | || ||||| | ||| ||| Sbjct 1413 TACACATGCAGTAACCTGTGAAATATTGATA 1443 >seq2511 Length=3308 Score = 89.7 bits (98), Expect = 4e-12 Identities = 210/312 (67%), Gaps = 10/312 (3%) Strand=Plus/Minus Query 390858 TCTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTG 390917 |||||| | |||||||| | ||| | || |||| |||| |||| | | ||||| Sbjct 1763 TCTTACAGACCCATCATAATTTACCCTTGCATCCTCTAGGCTTTTCACTATTCTCCTTTG 1704 Query 390918 GATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCAT 390977 || || ||||| |||||| ||||| || || | ||| | ||||||||| ||| | || Sbjct 1703 AATGTACCCAGTTTCTGCAATTTTACAGGCCGTGTCAATCAAACCTTCTCTCCCTCCAAT 1644 Query 390978 AACTTGGAAGAAAAATTCCATAGGATTGAGTCC--AGAAATAAATGATCCAAAACAAAAT 391035 | | || ||||||||||| || | ||| | ||| ||||||| | || ||| |||| Sbjct 1643 AGCATGAAAGAAAAATTCAATTGCATTTAATCCTGTGAAATAACT-ATTTGTAAC-AAAT 1586 Query 391036 CCT---CTTGCAGAAGGACTATCATCATGTTGTGCAAACATAGGTAATGTTCTATTATTA 391092 ||| ||| | | | || ||||| | |||| || ||||| ||| | |||| Sbjct 1585 CCTTTACTTTCTGCTG---AATAATCATCCTTAACAAAATGAGATAATGCTCTTTCATTA 1529 Query 391093 AATCTTTTTTGAATTCGTTTATCTTCGACAATAACTTGTCCAATACATCCTGCAATCTGT 391152 |||| |||||||||| |||| | | | ||| || | |||| | | || |||| Sbjct 1528 AATCCAAAAGGAATTCGTTTTCCTTCTAAATTTTGTTGCCCTACACATGCAGTAACCTGT 1469 Query 391153 GCAGCATTCATA 391164 | | ||| ||| Sbjct 1468 GAAATATTGATA 1457 >seq4348 Length=2415 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 429292 TACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACATT 429351 |||||| || |||||| || | |||| || | |||||| |||||| || | ||| | Sbjct 2406 TACATTTAACATTTTTCCTTTTAATGGACATTCTCCATAAAAATCTCTTCCTACTACACT 2347 Query 429352 TAGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACATTT 429411 |||||||| |||| || || || || ||||||||||| || ||||| || |||||||| Sbjct 2346 CAGTCCAGAATTTGCTAATGTCTTGGCAGAATCTCCTTCGGTTAAAATTAGAGTACATTT 2287 Query 429412 A 429412 | Sbjct 2286 A 2286 >seq678 Length=924 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 429292 TACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACATT 429351 |||||| || |||||| || | |||||| || |||||| |||||| || | ||| | Sbjct 174 TACATTTAACATTTTTCCTTTTAATGGAAACACTCCATAAAAATCTCTTCCTACTACACT 233 Query 429352 TAGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACATTT 429411 |||||||| | || || || || || ||||||||||| || ||||| || |||||||| Sbjct 234 CAGTCCAGAAACAGCTAATGTCTTGGCAGAATCTCCTTCGGTTAAAATTAGAGTACATTT 293 Query 429412 A 429412 | Sbjct 294 A 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028850342234230