Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1856 179 4e-40 seq166 113 5e-20 >seq1856 Length=1984 Score = 179 bits (198), Expect = 4e-40 Identities = 371/549 (68%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||||||||||||| || |||| |||||||| ||| |||||||||||||| || | Sbjct 1459 ACATGCAAAATCAGTGTGGCAACCCTCATCTCTTGATATTAATTCATTAGAAAATGTAAG 1400 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 |||||||| || |||||||| || | |||||| || | ||||| || | | |||||| Sbjct 1399 ACCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAGAA 1340 Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGA 37354 ||| ||||| || |||||||| || | || | | | | |||| | | | | | || Sbjct 1339 AATTCCTTCTACAGCTGCAAAGGCGATTAG-CCTATCGCTAAAGGGGGAATCTGA--AGC 1283 Query 37355 AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTT 37414 ||| ||||| || ||| || |||||| | || |||||| || ||| || Sbjct 1282 AATGTATTTTAATGCCCATTCGGCCTTTTTCCTGACTATAGGTATTGTTGAAACTGCATT 1223 Query 37415 TAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACAT 37474 || || || || |||||| ||| | | | ||||| || ||| |||||| Sbjct 1222 AAATAGCCTATTCTTCTCTTCAGAATCAGAAACCAACACTTCAATAAGCAAAGAATACAT 1163 Query 37475 TTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAA 37534 ||||| || || ||| |||||||| || || |||||| || ||||| | || Sbjct 1162 CTCAGAATGGATTACTTCCATAGCTATTTGGAAGGAATAAAATGCTCTTGCTTCTGGTAT 1103 Query 37535 TTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGC 37594 ||||| || | ||| || ||| | ||||| |||| || |||||| || || Sbjct 1102 CTGAACCTCACTTGCAAATCTTACAGCCAGATTTTCCATAACAATACCATCAGATGCCGC 1043 Query 37595 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTTTCCA 37651 ||| || || || |||| ||| ||||||| ||||||| ||||| || |||| ||| Sbjct 1042 AAAAAATGCGAGTACATGTTTAATAAAATTTCTTTCATCTTCATTCAATCTGTTTTCCCA 983 Query 37652 ATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACG 37711 ||| |||| | |||||||||||| ||| |||||||| | || ||| Sbjct 982 TTCAAACTTATCAACAGTTAAATCAACTTCCTCAGTTGTCCAAAACGATCCCTCTGCTAA 923 Query 37712 TTTATACAT 37720 ||||||||| Sbjct 922 TTTATACAT 914 >seq166 Length=1757 Score = 113 bits (124), Expect = 5e-20 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||||||||||||| || |||| ||||| || ||| |||||||||||||| || | Sbjct 290 ACATGCAAAATCAGTGTGNCAACCCTCATCNCTTGATATTAATTCATTAGAAAATGTAAG 231 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 |||||||| || |||||||| || | |||||| || | ||||| || | | |||||| Sbjct 230 ACCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAGAA 171 Query 37295 AATACCTTCAACTGCTGCAAATGC 37318 ||| ||||| || |||||||| || Sbjct 170 AATTCCTTCTACAGCTGCAAAGGC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592254406829080