Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2381 163 4e-35 seq7557 158 2e-33 seq7574 118 1e-21 seq1083 86.0 8e-12 >seq2381 Length=3349 Score = 163 bits (180), Expect = 4e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || || ||||| || || || | ||||| || | ||| Sbjct 869 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCA 810 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || ||||||| || ||||| || || ||||| || ||||| ||||| Sbjct 809 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAA 750 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||||||||||||||||||||| |||||||| ||| | | ||| |||| |||||| Sbjct 749 CAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAAC 690 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||| || ||| || || | |||||||| Sbjct 689 ATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAG 655 >seq7557 Length=3014 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || || ||||| || || || | ||||| || | ||| Sbjct 2556 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCA 2497 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || ||||||| || ||||| || || ||||| || ||||| ||||| Sbjct 2496 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAA 2437 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||||||||||||||||||||| |||||||| ||| | | ||| |||| |||||| Sbjct 2436 CAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAAC 2377 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||| || ||| | || | |||||||| Sbjct 2376 ATCCAAAAAGAAAGTACCATTCATTTGGTTCTAAG 2342 >seq7574 Length=465 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || || ||||| || || || | ||||| || | ||| Sbjct 427 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCA 368 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || ||||||| || ||||| || || ||||| || ||||| ||||| Sbjct 367 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAA 308 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| ||||||| |||||| |||||||| ||| | | || |||| |||||| Sbjct 307 CAAAGACTTATAAAAAAAAATAAACAACTTGAAGACGGAAGAAGTCTTTCTGACTACAAC 248 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | ||||| || ||| || || | |||||||| Sbjct 247 ATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAG 213 >seq1083 Length=2713 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 181829 AATATCTTTTGGGTTAAACGGGGGTATATAACAAGAAAATCCAGTTCCAATACCCTCACT 181888 ||| ||||||||| || |||||||| || | | || ||||||||||| ||| | Sbjct 1563 AATTTCTTTTGGGCAGAATTGGGGTATAAAAGTACTCCAGCCTGTTCCAATACCTTCAGT 1504 Query 181889 TCCATTGACCAAGATCATGGGTATAGTAGGCATATAGAACTCTGGTTCAATAGAGCGACC 181948 ||||||||| || | ||| || | | | || ||| || | ||||||||||| || Sbjct 1503 TCCATTGACTAAAACCATAGGAACAATTGGAATAAAGTAATCTGGTTCAATGTTTTTGCC 1444 Query 181949 ATCATCATCCAAATAATTAAGAATAGCATCATCCTTGGGATCAAAAATTTTA 182000 ||| |||| || |||||| | | || ||||| || ||||||||| ||| Sbjct 1443 ATCTTCATTCAGATAATTTAACAACGCTTCATCTTTTTCATCAAAAATCTTA 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657793102419440