Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7557 123 4e-23 seq2381 123 4e-23 seq7574 95.1 2e-14 >seq7557 Length=3014 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||| |||| || |||| ||| | ||| ||||| || || ||||| || Sbjct 2330 CCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 2389 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | |||| || || | |||||| || |||||||| | ||| |||||||| || ||| Sbjct 2390 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 2449 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 ||||||||||| || || ||||| | ||| | ||| ||| ||||| || | || || Sbjct 2450 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 2509 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||| ||| || || || ||||| || || || ||||| ||||||||| Sbjct 2510 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 2557 >seq2381 Length=3349 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||| |||| || |||| ||| | ||| ||||| || || ||||| || Sbjct 643 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 702 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | |||| || || | |||||| || |||||||| | ||| |||||||| || ||| Sbjct 703 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 762 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 ||||||||||| || || ||||| | ||| | ||| ||| ||||| || | || || Sbjct 763 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 822 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||| ||| || || || ||||| || || || ||||| ||||||||| Sbjct 823 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 870 >seq7574 Length=465 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 193235 TCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAAT 193294 ||| |||||||| || |||||||||||||| || || ||||| | ||| | ||| ||| Sbjct 302 TCTTTGTTGATCTGGTGGTATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAAT 361 Query 193295 AGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATAT 193354 ||||| || | || || |||| ||| || || || ||||| || || || ||||| || Sbjct 362 GGTATCTGATGGTTCTACCTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGAT 421 Query 193355 TTGCATT 193361 ||||||| Sbjct 422 TTGCATT 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899559632654640