Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1148 93.3 1e-13 seq4813 87.8 5e-12 seq5717 86.0 2e-11 seq7255 84.2 6e-11 seq624 84.2 6e-11 >seq1148 Length=2199 Score = 93.3 bits (102), Expect = 1e-13 Identities = 166/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 155304 TTACTCTTTTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTA 155363 ||||||| ||| | || ||| | ||||| |||||||||| | |||| | | ||||| Sbjct 964 TTACTCTCTTCTAATGCTGCATAGTAAATACATTCAAAGATATTTCTATTTAATATTTTA 905 Query 155364 GCCTCCTCAGATGTAAATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACT 155423 || ||||| || ||||| || | | | || |||| || ||||| || || ||| Sbjct 904 GCTTCCTCGGAATCAAATGATATTTTAAGCATGGCAAATAAATCAGCTAAGCCTTGTACT 845 Query 155424 CCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTCTTCTTGT-TTGGGTAAAA 155482 |||||||| | || | |||| | ||||| || ||| |||| | |||||||| Sbjct 844 CCAATACCAATGGGTCTATGCTTAATGTTGCTACTTTTTG-CTTCAACTACAGGGTAAAA 786 Query 155483 ATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTCTGCTAATTT 155542 ||| |||||| || || ||||||||| || | ||||| ||||| || |||||| Sbjct 785 ATTGTAATCAATTATTTTGTTTAAATTTCTACAAACAACCTTTGTTACTTCCATTAATTT 726 >seq4813 Length=2720 Score = 87.8 bits (96), Expect = 5e-12 Identities = 165/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 155304 TTACTCTTTTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTA 155363 ||||||| ||| | || ||| | ||||| ||||| |||| | |||| | | ||||| Sbjct 2719 TTACTCTCTTCTAATGCTGCATAGTAAATACATTCAAATATATTTCTATTTAATATTTTA 2660 Query 155364 GCCTCCTCAGATGTAAATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACT 155423 || ||||| || ||||| || | | | || |||| || ||||| || || ||| Sbjct 2659 GCTTCCTCGGAATCAAATGATATTTTAAGCATGGCAAATAAATCAGCTAAGCCTTGTACT 2600 Query 155424 CCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTCTTCTTGT-TTGGGTAAAA 155482 |||||||| | || | |||| | ||||| || ||| |||| | |||||||| Sbjct 2599 CCAATACCAATGGGTCTATGCTTAATGTTGCTACTTTTTG-CTTCAACTACAGGGTAAAA 2541 Query 155483 ATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTCTGCTAATTT 155542 ||| |||||| || || ||||||||| || | ||||| ||||| || |||||| Sbjct 2540 ATTGTAATCAATTATTTTGTTTAAATTTCTACAAACAACCTTTGTTACTTCCATTAATTT 2481 >seq5717 Length=1870 Score = 86.0 bits (94), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 233600 GCACACGCTTTACCCATTAAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGA 233659 ||||| ||||||| | ||| | ||| || | ||||| ||||||||||| || |||| | Sbjct 557 GCACATACTTTACCTAATAATGCTTCAATAAGATGACCTATAGTCATTCTGCTAGGTATA 616 Query 233660 GCGTGTGGATTGATAATTAAATCTGGACGTACTCCCTCCGATGTAAAAGGCATATCTTTT 233719 || |||||||| ||||| | ||| || | ||| ||| ||||| || | ||| | | Sbjct 617 GCATGTGGATTAATAATAATATCAGGTATCAATCCATCCTTAGTAAATGGTAAATCCTCT 676 Query 233720 TCAGGGATTATCAGTCCAACTGTTCCCTTTTGGCCGCATCTACTACAGAATTTATCACCC 233779 | ||| | | || | ||||| ||||| || ||||||| |||||||||||| Sbjct 677 TGTCTCATTGTTATGCCTATAGTTCCTTTTTGACCATGTCTACTAGCAAATTTATCACCC 736 >seq7255 Length=3735 Score = 84.2 bits (92), Expect = 6e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 301861 GCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTT 301920 || |||||||||||||| |||||||| || || | || || | |||||||||||||||| Sbjct 436 GCCACACCAGCAAAGTGAAAAGTATTTAGGGTCATCTGGGTGGCTGGCTCACCAATACTT 495 Query 301921 TGTGCCGCAATCATACCAACCATTTC 301946 ||||| |||| | |||||||| || Sbjct 496 TGTGCTGCAAGTGTTCCAACCATCTC 521 >seq624 Length=5948 Score = 84.2 bits (92), Expect = 6e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 301861 GCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTT 301920 || |||||||||||||| |||||||| || || | || || | |||||||||||||||| Sbjct 4810 GCCACACCAGCAAAGTGAAAAGTATTTAGGGTCATCTGGGTGGCTGGCTCACCAATACTT 4869 Query 301921 TGTGCCGCAATCATACCAACCATTTC 301946 ||||| |||| | |||||||| || Sbjct 4870 TGTGCTGCAAGTGTTCCAACCATCTC 4895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471658686473899