Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1083 143 2e-28 seq1148 138 8e-27 seq678 131 1e-24 seq4249 109 4e-18 seq1269 109 4e-18 seq166 104 2e-16 seq1856 102 6e-16 seq8103 98.7 7e-15 seq5609 95.1 9e-14 seq2711 95.1 9e-14 seq3482 89.7 4e-12 seq7255 86.0 5e-11 >seq1083 Length=2713 Score = 143 bits (158), Expect = 2e-28 Identities = 230/331 (69%), Gaps = 0/331 (0%) Strand=Plus/Plus Query 400293 TAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCT 400352 ||||||||| |||||||| || || |||||||| || || ||||| ||| | ||||| || Sbjct 351 TAAATGTACTCTAATTTTAACCGAAGGAGATTCTGCCAAGACATTAGCTGTTTCTGGACT 410 Query 400353 TAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGT 400412 | || | |||||||||| ||||||||| || ||| | | ||||||| | || ||||| Sbjct 411 GAGTGNAGTAGGAAGAGATTTTTATGGAGTGTTTCCATTAAAAGGAAAANTGTTAAATGT 470 Query 400413 TAGGGATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaT 400472 || || || | | ||| | ||| || || | ||||| | ||| | || |||| Sbjct 471 AAGAGAGGCAAATGTTAAGCAGATTAGTGAAAACAAAGAAATAAGTGCACTAAAGCAAAT 530 Query 400473 TGTTGGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTAT 400532 | || | |||| || | |||||| || | |||| ||| ||||||| | | Sbjct 531 ATTAGGGTTAAAACACGGGACTGTTTATAATACAACCCAAGGCTTAAGATATGGACATGT 590 Query 400533 TATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTT 400592 | || | |||| || ||| |||||| | |||||||||||||||||||| ||||| Sbjct 591 CTTAATCATGACTGACCAGGATCATGATGGATCACATATCAAAGGATTAATCATAAATTT 650 Query 400593 TATCCATTGTTTTTGGCCATCTCTTGTTAAA 400623 | || ||| | || |||||| | ||| Sbjct 651 CTTTGATCATTTCTTTCCTTCTCTTCTAAAA 681 >seq1148 Length=2199 Score = 138 bits (152), Expect = 8e-27 Identities = 292/432 (68%), Gaps = 9/432 (2%) Strand=Plus/Plus Query 164046 CCTATTGGTATTGGAGTTCAGGGATTGGCTGATGTATTTGCCATGTTTAAGACTCCTTTT 164105 || |||||||||||||| || || || |||||| ||||||||||| |||| | | ||| Sbjct 831 CCCATTGGTATTGGAGTACAAGGCTTAGCTGATTTATTTGCCATGCTTAAAATATCATTT 890 Query 164106 GATTCGGAAATTGCTCGTGATCTCAATCGTAAAATTTTCGAAACAATTTATTATGGAGCT 164165 ||||| || ||| | ||| | || || || ||| ||||| |||| ||| Sbjct 891 GATTCCGAGGAAGCTAAAATATTAAATAGAAATATCTTTGAATGTATTTACTATGCAGCA 950 Query 164166 TTAACAGAATCCAATAAACTTGCTAGAGAATTTGGTACATATCAAACTTATCAAGGAAGT 164225 ||| ||| || | | |||| |||| || | ||| | ||| | ||||| Sbjct 951 TTAGAAGAGAGTAACCTATTGGCTATAGAAGAAGGAGCTTATTCATCTTTTGAAGGATCA 1010 Query 164226 CCTATTTCTCAAGGAAAATTCCAATTTGATCTTTGGAATTTCGATAAATCACAATTGAGC 164285 ||||||||| ||||| |||| ||||||||| | |||||| | |||| | | | | | Sbjct 1011 CCTATTTCTAAAGGAGAATTTCAATTTGATATGTGGAAT---GTTAAA--CCTAGTAATC 1065 Query 164286 GGAATGTGGGATTGGGAACTTTTGCGTCAAGAAATTTTAAATCATGGTGTTCGTAATAGT 164345 || | |||||||| | | | | |||| | || ||||| || | ||| | Sbjct 1066 ---AT-TTAGATTGGGAGTCTCTTAGAAATAAAATCATTAAACATGGAGTAAGGAATTCT 1121 Query 164346 CTAGTTACAACCTGTATGCCAACTGCAAGTACTTCTCAAATTATGGGATGGAATGAATGT 164405 | | || | ||||||||||| || | ||| || ||||| | || | |||||||| Sbjct 1122 TTGTTAACTGCTTGTATGCCAACAGCTACTACCTCACAAATACTTGGGTTTAATGAATGC 1181 Query 164406 ATTGAACCTTATACAGAAAATATTTATTCAAGAAGTACTATGGCTGGAGAATATTTTGTG 164465 |||||||| | ||| || ||||| ||||| | || |||||||||||||| || Sbjct 1182 ATTGAACCATTTACTTCTAACATTTACACAAGACGAACATTGGCTGGAGAATATCAGGTA 1241 Query 164466 ATTAATAAACAT 164477 |||||||||||| Sbjct 1242 ATTAATAAACAT 1253 >seq678 Length=924 Score = 131 bits (144), Expect = 1e-24 Identities = 206/294 (70%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 400293 TAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCT 400352 ||||||||| |||||||| || || |||||||| || || ||||| ||| | ||||| || Sbjct 294 TAAATGTACTCTAATTTTAACCGAAGGAGATTCTGCCAAGACATTAGCTGTTTCTGGACT 235 Query 400353 TAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGT 400412 | ||| | |||||||||| ||||||||| || ||| | | ||||||| | || ||||| Sbjct 234 GAGTGTAGTAGGAAGAGATTTTTATGGAGTGTTTCCATTAAAAGGAAAAATGTTAAATGT 175 Query 400413 TAGGGATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaT 400472 || || || | | ||| | ||| || || | ||||| | ||| | || |||| Sbjct 174 AAGAGAAGCAAATGTTAAGCAGATTAGTGAAAACAAAGAAATAAGTGCACTAAAGCAAAT 115 Query 400473 TGTTGGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTAT 400532 | || | |||| || | |||||| || | |||| ||| ||||||| | | Sbjct 114 ATTAGGGTTAAAACACGGGACTGTTTATAATACAACCCAAGGCTTAAGATATGGACATGT 55 Query 400533 TATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGAT-TAATCA 400585 | || | |||| || ||| |||||| | ||||||||||||| |||||| Sbjct 54 CTTAATCATGACTGACCAGGATCATGATGGATCACATATCAAAGGATATAATCA 1 >seq4249 Length=2775 Score = 109 bits (120), Expect = 4e-18 Identities = 191/276 (69%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||||| ||||| |||||||| ||||| || || | | ||||| |||| || Sbjct 967 ATCAATGTCTTCGCCTCCCAAAAATGTATTCCCATTTGTGGATAGCACTTGAAAAATGCC 908 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || || | |||| || | |||| ||| |||||||| | |||| ||| | || Sbjct 907 ATTTTTTATTTTTAAAATAGATATATCAAAGGTACCACCACCTAAATCATAAACAGCCAC 848 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| ||| |||| |||| ||| |||| || |||||||||||||||||||| Sbjct 847 T---ATTCCTTCTTCTTTGTTTA-ATC-----CATAAGCCAAAGCAGCAGCAGTTGGTTC 797 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| | ||||| | ||||| | |||||| | | | |||| |||||| ||||| || Sbjct 796 ATTGAGTATTCTAATTACATTTAAACCAGCTAATTTAGCTGCTGTTTTAGTAGCTTGCCT 737 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAAC 282468 ||| ||| | ||||||||| || |||||||| || Sbjct 736 TTGATGATCATCAAAATATGCCGGTACAGTAATTAC 701 >seq1269 Length=1176 Score = 109 bits (120), Expect = 4e-18 Identities = 191/276 (69%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||||| ||||| |||||||| ||||| || || | | ||||| |||| || Sbjct 548 ATCAATGTCTTCGCCTCCCAAAAATGTATTCCCATTTGTGGATAGCACTTGAAAAATGCC 607 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || || | |||| || | |||| ||| |||||||| | |||| ||| | || Sbjct 608 ATTTTTTATTTTTAAAATAGATATATCAAAGGTACCACCACCTAAATCATAAACAGCCAC 667 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| ||| |||| |||| ||| |||| || |||||||||||||||||||| Sbjct 668 T---ATTCCTTCTTCTTTGTTTA-ATC-----CATAAGCCAAAGCAGCAGCAGTTGGTTC 718 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| | ||||| | ||||| | |||||| | | | |||| |||||| ||||| || Sbjct 719 ATTGAGTATTCTAATTACATTTAAACCAGCTAATTTAGCTGCTGTTTTAGTAGCTTGCCT 778 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAAC 282468 ||| ||| | ||||||||| || |||||||| || Sbjct 779 TTGATGATCATCAAAATATGCCGGTACAGTAATTAC 814 >seq166 Length=1757 Score = 104 bits (114), Expect = 2e-16 Identities = 257/382 (67%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 161035 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 161093 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 527 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 469 Query 161094 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 161153 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 468 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 409 Query 161154 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCG 161212 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| ||| Sbjct 408 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAACTGCTGAA 350 Query 161213 TCAATAATTTGGTAAACAACAGATTCTTTCAAACGA-TTATT---CAACAATGAATACAT 161268 ||| |||| ||| | | ||| | | | || ||||| ||| || | | Sbjct 349 GTAATGATTTCGTAGATA--CGAT--TAGCCGATGATTTATTTTGCAAATGAGAGTGTAA 294 Query 161269 AATACAAGCAAGTTCTACATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAAT 161328 || ||| |||| || || ||||| | | || |||| ||| || | | Sbjct 293 AAGACATGCAAAATCAGTGTGNCAACCCTCATCNCTTGATATTAATTCATTAGAAAATGT 234 Query 161329 TAGACCAGGCATTACATGCATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCC 161388 ||||| ||||| || | |||| | |||| ||| ||||| |||||||| || | Sbjct 233 AAGACCTGGCAT------CAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCT 180 Query 161389 ACTAAAGAAAACGCCTTCTACA 161410 ||||||||||| ||||||||| Sbjct 179 ACTAAAGAAAATTCCTTCTACA 158 >seq1856 Length=1984 Score = 102 bits (112), Expect = 6e-16 Identities = 257/382 (67%), Gaps = 18/382 (5%) Strand=Plus/Minus Query 161035 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 161093 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 1696 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 1638 Query 161094 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 161153 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 1637 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 1578 Query 161154 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCG 161212 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| ||| Sbjct 1577 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAACTGCTGAA 1519 Query 161213 TCAATAATTTGGTAAACAACAGATTCTTTCAAACGA-TTATT---CAACAATGAATACAT 161268 ||| |||| ||| | | ||| | | | || ||||| ||| || | | Sbjct 1518 GTAATGATTTCGTAGATA--CGAT--TAGCCGATGATTTATTTTGCAAATGAGAGTGTAA 1463 Query 161269 AATACAAGCAAGTTCTACATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAAT 161328 || ||| |||| || || ||||| | | || |||| ||| || | | Sbjct 1462 AAGACATGCAAAATCAGTGTGGCAACCCTCATCTCTTGATATTAATTCATTAGAAAATGT 1403 Query 161329 TAGACCAGGCATTACATGCATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCC 161388 ||||| ||||| || | |||| | |||| ||| ||||| |||||||| || | Sbjct 1402 AAGACCTGGCAT------CAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCT 1349 Query 161389 ACTAAAGAAAACGCCTTCTACA 161410 ||||||||||| ||||||||| Sbjct 1348 ACTAAAGAAAATTCCTTCTACA 1327 Score = 100 bits (110), Expect = 2e-15 Identities = 136/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 161673 TAACAATACCATCAGCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCAT 161732 ||||||||||||||| ||||||||||||||| | ||| || ||||||||||||| |||| Sbjct 1064 TAACAATACCATCAGATGCCGCAAAAAATGCGAGTACATGTTTAATAAAATTTCTTTCAT 1005 Query 161733 CATCGCTCAAATGATTATTCCAATCATTCACATCTTTTGCCAAATCCACTTCTTCAACTG 161792 | || |||| || | ||| ||| | ||| | ||||| ||||| ||| || Sbjct 1004 CTTCATTCAATCTGTTTTCCCATTCAAACTTATCAACAGTTAAATCAACTTCCTCAGTTG 945 Query 161793 TCCAATAATTTTTCATCTGAT-CCTTGTAATTATCCCATACTTTTTGGTATTTAATAGGA 161851 ||||| || | | |||| | || || | ||||||| ||| ||||||||||||| Sbjct 944 TCCAA-AACGATCCCTCTGCTAATTTATACATTTCCCATATTTTGGGGTATTTAATAGG- 887 Query 161852 TGAACA 161857 ||||| Sbjct 886 -GAACA 882 >seq8103 Length=650 Score = 98.7 bits (108), Expect = 7e-15 Identities = 128/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 161035 GAtttttttCATGTATTCGAATGGATTATCAACATTG-AATTTTTTGCGATAACCAAGAT 161093 ||| || | ||| | || || ||||||| || ||| ||| |||||| | | ||||||| Sbjct 408 GATATTCTCCATAAAATCAAAAGGATTATTTACTTTGTAATGTTTTGCCA-AGCCAAGAT 350 Query 161094 CTACAAGTAATCTGTCAGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATAC 161153 ||| |||||| || |||||||| |||| |||||| ||||| || |||||||| | Sbjct 349 TTACCAGTAATACATCCGCAACATACTTAACATATTGCGACATAAGAGATGAATTCATTC 290 Query 161154 CAAG-AAGTTTACACGGAAGAGAATCATTAATAAATTCTTCTTCAATTTCAA 161204 |||| || | ||| ||| ||||| ||| |||||||||||| | ||||| Sbjct 289 CAAGCAAATCTACTTT-AAGGGAATCTCTAACAAATTCTTCTTCTAATTCAA 239 >seq5609 Length=2322 Score = 95.1 bits (104), Expect = 9e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || || || || |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 966 GCTACTATTGCTTTTGGTATGGGTATTAATAAGAAGGATGTTAGGTTTGTTATTCATTAC 907 Query 131243 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 131302 ||| |||| | | || ||||||| ||||| | ||||||||||| | |||||| Sbjct 906 TCCATTCCTAAGAGTTTAGATTGTTATTACCAAGAGACAGGTAGAGCAGGAAGAGATGGA 847 >seq2711 Length=2586 Score = 95.1 bits (104), Expect = 9e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || || || || |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 451 GCTACTATTGCCTTTGGTATGGGTATTAATAAGAAGGATGTTAGGTTTGTTATTCATTAC 392 Query 131243 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 131302 ||| |||| | | || ||||||| ||||| | ||||||||||| | |||||| Sbjct 391 TCCATTCCTAAGAGTTTAGATTGTTATTACCAAGAGACAGGTAGAGCAGGAAGAGATGGA 332 >seq3482 Length=1121 Score = 89.7 bits (98), Expect = 4e-12 Identities = 93/121 (77%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || || || || |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 394 GCTACTATTGCTTTTGGTATGGGTATTAATAAGAAGGATGTTAGGTTTGTTATTCATTAC 453 Query 131243 GGAGCTCCCAAGAATAT-TGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGG 131301 ||| |||| | | || ||||||| ||||| | ||||||||||| | ||||| Sbjct 454 TCCATTCCTAAGAGTTTANGATTGTTATTACCAAGAGACAGGTAGAGCAGGAAGAGATGG 513 Query 131302 A 131302 | Sbjct 514 A 514 >seq7255 Length=3735 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || ||||| | | |||||||| || ||||| || | || ||| | |||||| | Sbjct 2684 GGAAAGGAAGGAAGGGTGAGAGGAAACTTAATGGGTAAAAGAGTTGATTTTTCTGCAAGA 2625 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 |||| ||||| | ||| ||||||||| | || ||| ||||||||||| | | || Sbjct 2624 TCAGTAATTACCCCAGATTCTAATATTGACTTAAACGAACTTGGTGTTCCTATTAAGATA 2565 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467 || | | || ||| || | |||||| ||||||| | |||||| || Sbjct 2564 GCAATGGTACACACCTTTCCTGAGAGAGTAACATCTTTTAATATTAGCAAATTGACTAAA 2505 Query 432468 TTAGTGAAAAATGGTAAAAGAGTATATCCAGGTGCCAATTTTGTAAT 432514 ||||| |||||||| || | | ||||| || || |||| |||||| Sbjct 2504 TTAGTAAAAAATGGACCAACAATTTATCCGGGAGCTAATTATGTAAT 2458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740216669912502