Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2381 201 2e-46 seq7557 197 3e-45 seq7574 170 4e-37 seq932 105 1e-17 seq4968 93.3 8e-14 >seq2381 Length=3349 Score = 201 bits (222), Expect = 2e-46 Identities = 182/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | ||||| || || || ||| |||||| || || || || ||||| Sbjct 643 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 702 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || |||| |||||||| |||||||| |||||||| || ||||||||||||||||| ||| Sbjct 703 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 762 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || || ||||| || ||||| ||||| ||||| ||||| |||||||| Sbjct 763 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 822 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTA 82812 || ||||| || ||||| ||||| | ||||| ||||| || ||||||| Sbjct 823 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 871 >seq7557 Length=3014 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | ||||| || || | ||| |||||| || || || || ||||| Sbjct 2330 CCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 2389 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || |||| |||||||| |||||||| |||||||| || ||||||||||||||||| ||| Sbjct 2390 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 2449 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || || ||||| || ||||| ||||| ||||| ||||| |||||||| Sbjct 2450 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 2509 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTA 82812 || ||||| || ||||| ||||| | ||||| ||||| || ||||||| Sbjct 2510 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 2558 >seq7574 Length=465 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | ||||| || || || ||| |||||| || || || || ||||| Sbjct 201 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 260 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| |||||||| |||||||| || ||||||||||||||||| ||| Sbjct 261 AGACTTCTTCCGTCTTCAAGTTGTTTATTTTTTTTTATAAGTCTTTGTTGATCTGGTGGT 320 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || || ||||| || ||||| ||||| ||||| ||||| |||||||| Sbjct 321 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 380 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTA 82812 || ||||| || ||||| ||||| | ||||| ||||| || ||||||| Sbjct 381 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATTA 429 >seq932 Length=2997 Score = 105 bits (116), Expect = 1e-17 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 198342 TGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATG 198401 ||||||||| |||| ||| ||| | | ||| ||||||||| ||| | |||||||| Sbjct 1937 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 1878 Query 198402 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTATAGT 198461 || ||||| |||| |||| |||||| | |||||| ||||| || || | | || Sbjct 1877 TATTGGGCCAAAACATTACTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 1819 Query 198462 ATCT-ATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTG 198520 || | || | || ||||||| | | || || | ||||| || |||||| |||| Sbjct 1818 ATTTTATTTGAATGATAAGTATTCAATTGATGGAAATGATCCAAATGGATACCTAGGAAT 1759 Query 198521 TATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGGGAA 198580 ||||||||||||||| |||| | |||| | ||| || ||| || |||| || Sbjct 1758 TATGTGGTCTATTTGTGGATCAATGGATCAGGGTTGGGCGGAGAGAGAAATTATTGGTAA 1699 Query 198581 GATAAGATATATGAA 198595 |||||| |||||| Sbjct 1698 AATAAGAGCTATGAA 1684 >seq4968 Length=2160 Score = 93.3 bits (102), Expect = 8e-14 Identities = 175/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 198342 TGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATG 198401 ||||||||| |||| ||| ||| | | ||| ||||||||| ||| | |||||||| Sbjct 307 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 248 Query 198402 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTATAGT 198461 || ||||| |||| | || |||||| | |||||| ||||| || || | | || Sbjct 247 TATTGGGCCAAAACATTGCTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 189 Query 198462 ATCT-ATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTG 198520 || | || | || |||| || | || || | ||||| || |||||| |||| Sbjct 188 ATTTTATTTGAATGATAAATATTCTATTGATGGAAATGATCCAAATGGATACCTAGGAAT 129 Query 198521 TATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGGGAA 198580 ||||||||||||||| |||| | |||| | ||| || ||| || |||| || Sbjct 128 TATGTGGTCTATTTGTGGATCAATGGATCAGGGTTGGGCGGAGAGAGAAATTATTGGTAA 69 Query 198581 GATAAGATATATGAA 198595 |||||| |||||| Sbjct 68 AATAAGAGCTATGAA 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981721191196753