Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq932 105 1e-17 seq4968 93.3 8e-14 >seq932 Length=2997 Score = 105 bits (116), Expect = 1e-17 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 183025 TGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 183084 ||||||||| ||||| ||| ||| ||| ||| ||||||||| ||| | || ||||| Sbjct 1937 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 1878 Query 183085 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGT 183144 || ||||| |||| |||| |||||| | ||| || ||||| || || | | || Sbjct 1877 TATTGGGCCAAAACATTACTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 1819 Query 183145 ATCT-ATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTG 183203 || | || |||| ||||||| | | || || | ||||| || |||||| |||| Sbjct 1818 ATTTTATTTGAATGATAAGTATTCAATTGATGGAAATGATCCAAATGGATACCTAGGAAT 1759 Query 183204 TATGTGGTCTATTTGCGGAT 183223 ||||||||||||||| |||| Sbjct 1758 TATGTGGTCTATTTGTGGAT 1739 >seq4968 Length=2160 Score = 93.3 bits (102), Expect = 8e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 183025 TGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 183084 ||||||||| ||||| ||| ||| ||| ||| ||||||||| ||| | || ||||| Sbjct 307 TGGAATGCAGGACAAAAACAAATGGTGATTACAGGTAAAATGCATGGTTATGTAAGAATG 248 Query 183085 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGT 183144 || ||||| |||| | || |||||| | ||| || ||||| || || | | || Sbjct 247 TATTGGGCCAAAACATTGCTACAATGGAGCAAAACACCAGAAGAAGCACTG-GAAAGAGC 189 Query 183145 ATCT-ATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTG 183203 || | || |||| |||| || | || || | ||||| || |||||| |||| Sbjct 188 ATTTTATTTGAATGATAAATATTCTATTGATGGAAATGATCCAAATGGATACCTAGGAAT 129 Query 183204 TATGTGGTCTATTTGCGGAT 183223 ||||||||||||||| |||| Sbjct 128 TATGTGGTCTATTTGTGGAT 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903316036922720